version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3777 42.22 0 4610258..4610527 + 89 157963607 - Spea_3795 - twin arginine-targeting protein translocase 3778 44.19 0 4610534..4610929 + 131 157963608 - Spea_3796 - twin-arginine translocation protein, TatB subunit 3779 44.23 0 4610933..4611694 + 253 157963609 - Spea_3797 - Sec-independent protein translocase, TatC subunit 3780 43.06 0 4611885..4612388 + 167 157963610 - Spea_3798 - hypothetical protein 3781 45.79 0 4612388..4613182 + 264 157963611 - Spea_3799 - TatD-related deoxyribonuclease 3782 42.12 0 4613182..4615047 + 621 157963612 - Spea_3800 - diguanylate cyclase 3783 45.80 0 4615072..4616082 + 336 157963613 - Spea_3801 - delta-aminolevulinic acid dehydratase 3784 44.86 0 4623827..4626550 - 907 157963614 - Spea_3803 - preprotein translocase subunit SecA 3785 44.89 0 4626611..4627510 - 299 157963615 - Spea_3804 - peptidase M23B 3786 43.93 0 4627538..4627990 + 150 157963616 - Spea_3805 - hypothetical protein 3787 43.76 0 4627998..4628918 - 306 157963617 - Spea_3806 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3788 47.81 0 4629096..4630283 - 395 157963618 - Spea_3807 - cell division protein FtsZ 3789 48.54 +1 4630315..4631550 - 411 157963619 - Spea_3808 - cell division protein FtsA 3790 45.88 0 4631554..4632342 - 262 157963620 - Spea_3809 - polypeptide-transport-associated domain-containing protein 3791 48.78 +1 4632424..4633893 - 489 157963621 - Spea_3810 - UDP-N-acetylmuramate--alanine ligase 3792 48.63 +1 4633895..4634992 - 365 157963622 - Spea_3811 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 3793 47.54 0 4635004..4636221 - 405 157963623 - Spea_3812 - cell division protein FtsW 3794 49.17 +1 4636211..4637530 - 439 157963624 - Spea_3813 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 3795 47.00 0 4637581..4638663 - 360 157963625 - Spea_3814 - phospho-N-acetylmuramoyl-pentapeptide-transferase 3796 47.75 0 4638663..4640042 - 459 157963626 - Spea_3815 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 3797 49.49 +1 4640039..4641505 - 488 157963627 - Spea_3816 - UDP-N-acetylmuramyl-tripeptide synthetase 3798 47.21 0 4641505..4643241 - 578 157963628 - Spea_3817 - peptidoglycan glycosyltransferase 3799 45.08 0 4643238..4643552 - 104 157963629 - Spea_3818 - cell division protein FtsL 3800 49.05 +1 4643569..4644516 - 315 157963630 - Spea_3819 - S-adenosyl-methyltransferase MraW 3801 47.28 0 4644547..4645005 - 152 157963631 - Spea_3820 - cell division protein MraZ 3802 44.64 0 4645522..4645866 + 114 157963632 - Spea_3821 - hypothetical protein 3803 49.06 +1 4645886..4647367 - 493 157963633 - Spea_3822 - glycerol kinase 3804 44.01 0 4647380..4647913 - 177 157963634 - Spea_3823 - hypothetical protein 3805 45.53 0 4648523..4649809 - 428 157963635 - Spea_3824 - membrane protein involved in aromatic hydrocarbon degradation 3806 44.55 0 4650323..4650928 - 201 157963636 - Spea_3825 - isopropylmalate isomerase small subunit 3807 50.61 +1 4650938..4652338 - 466 157963637 - Spea_3826 - isopropylmalate isomerase large subunit 3808 49.13 +1 4652341..4653435 - 364 157963638 - Spea_3827 - 3-isopropylmalate dehydrogenase 3809 47.96 0 4653521..4655092 - 523 157963639 - Spea_3828 - 2-isopropylmalate synthase 3810 43.33 0 4655617..4657407 + 596 157963640 - Spea_3829 - response regulator receiver protein 3811 49.62 +1 4657473..4659296 - 607 157963641 - Spea_3830 - ATP-dependent DNA helicase RecQ 3812 47.31 0 4659468..4659932 + 154 157963642 - Spea_3831 - hypothetical protein 3813 46.17 0 4660109..4660996 + 295 157963643 - Spea_3832 - transporter DMT superfamily protein 3814 43.86 0 4661049..4661561 - 170 157963644 - Spea_3833 - hypothetical protein 3815 47.54 0 4661631..4662953 - 440 157963645 - Spea_3834 - N-acetylglutamate synthase 3816 36.78 -2 4663527..4663700 - 57 157963646 - Spea_3835 - 50S ribosomal protein L33 3817 43.88 0 4663707..4663943 - 78 157963647 - Spea_3836 - ribosomal protein L28 3818 42.04 0 4664069..4664746 - 225 157963648 - Spea_3837 - DNA repair protein RadC 3819 51.59 +1 4664896..4666089 + 397 157963649 - Spea_3838 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 3820 48.37 0 4666089..4666547 + 152 157963650 - Spea_3839 - deoxyuridine 5'-triphosphate nucleotidohydrolase 3821 46.80 0 4666647..4667240 + 197 157963651 - Spea_3840 - nucleoid occlusion protein 3822 44.38 0 4667377..4669341 + 654 157963652 - Spea_3841 - peptidase S9 prolyl oligopeptidase 3823 48.64 +1 4669611..4670270 + 219 157963653 - Spea_3842 - GTP cyclohydrolase I 3824 47.51 0 4670794..4671435 - 213 157963654 - Spea_3843 - orotate phosphoribosyltransferase 3825 48.04 0 4671555..4672268 - 237 157963655 - Spea_3844 - ribonuclease PH 3826 48.96 +1 4672541..4673404 + 287 157963656 - Spea_3845 - hypothetical protein 3827 42.95 0 4673505..4674824 - 439 157963657 - Spea_3846 - HipA domain-containing protein 3828 45.04 0 4674824..4675105 - 93 157963658 - Spea_3847 - helix-turn-helix domain-containing protein 3829 49.24 +1 4675467..4675730 + 87 157963659 - Spea_3848 - hypothetical protein 3830 41.72 -1 4675864..4677174 - 436 157963660 - Spea_3849 - hypothetical protein 3831 46.43 0 4677747..4678586 + 279 157963661 - Spea_3850 - purine phosphorylase family 1 3832 47.75 0 4678747..4680015 + 422 157963662 - Spea_3851 - nucleoside transporter 3833 41.04 -1 4680141..4683110 - 989 157963663 - Spea_3852 - hypothetical protein 3834 46.39 0 4683269..4683919 - 216 157963664 - Spea_3853 - GntR family transcriptional regulator 3835 45.96 0 4684001..4684903 - 300 157963665 - Spea_3854 - LysR family transcriptional regulator 3836 48.56 +1 4684997..4686178 - 393 157963666 - Spea_3855 - D-galactarate dehydratase/Altronate hydrolase domain-containing protein 3837 43.15 0 4686175..4686510 - 111 157963667 - Spea_3856 - D-galactarate dehydratase 3838 45.90 0 4686977..4688623 + 548 157963668 - Spea_3857 - putative transporter 3839 50.45 +1 4688627..4689748 + 373 157963669 - Spea_3858 - mandelate racemase/muconate lactonizing protein 3840 49.54 +1 4690418..4691281 + 287 157963670 - Spea_3859 - cytochrome C family protein 3841 49.19 +1 4691291..4693012 + 573 157963671 - Spea_3860 - hypothetical protein 3842 50.06 +1 4693023..4695473 + 816 157963672 - Spea_3861 - anaerobic dimethyl sulfoxide reductase subunit A 3843 47.41 0 4695484..4696101 + 205 157963673 - Spea_3862 - dimethylsulfoxide reductase chain B 3844 47.17 0 4696103..4698190 + 695 157963674 - Spea_3863 - hypothetical protein 3845 44.61 0 4698245..4698865 + 206 157963675 - Spea_3864 - cytoplasmic chaperone TorD family protein 3846 42.35 0 4698856..4699221 + 121 157963676 - Spea_3865 - hypothetical protein 3847 42.14 0 4699284..4699976 - 230 157963677 - Spea_3866 - TetR family transcriptional regulator 3848 49.54 +1 4700246..4701979 + 577 157963678 - Spea_3867 - OPT family oligopeptide transporter 3849 46.50 0 4702004..4703218 - 404 157963679 - Spea_3868 - OmpA/MotB domain-containing protein 3850 49.24 +1 4703226..4714676 - 3816 157963680 - Spea_3869 - putative outer membrane adhesin like proteiin 3851 41.61 -1 4715208..4715642 - 144 157963681 - Spea_3870 - hypothetical protein 3852 49.13 +1 4715680..4717122 - 480 157963682 - Spea_3871 - pyridoxal-dependent decarboxylase 3853 48.57 +1 4717313..4718572 - 419 157963683 - Spea_3872 - amidohydrolase 3854 45.78 0 4718783..4719481 + 232 157963684 - Spea_3873 - hypothetical protein 3855 47.00 0 4719497..4720564 - 355 157963685 - Spea_3874 - aminoglycoside phosphotransferase 3856 50.22 +1 4720662..4721567 - 301 157963686 - Spea_3875 - hypothetical protein 3857 47.52 0 4721695..4722822 - 375 157963687 - Spea_3876 - hypothetical protein 3858 48.03 0 4723151..4723783 + 210 157963688 - Spea_3877 - guanylate kinase 3859 50.18 +1 4723845..4724129 + 94 157963689 - Spea_3878 - DNA-directed RNA polymerase subunit omega 3860 49.10 +1 4724143..4726248 + 701 157963690 - Spea_3879 - bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 3861 44.53 0 4726276..4726659 + 127 157963691 - Spea_3880 - putative endoribonuclease L-PSP 3862 50.22 +1 4726801..4727487 + 228 157963692 - Spea_3881 - tRNA guanosine-2'-O-methyltransferase 3863 46.86 0 4727800..4729455 + 551 157963693 - Spea_3882 - AMP-dependent synthetase and ligase 3864 46.86 0 4729636..4730559 + 307 157963694 - Spea_3883 - CaCA family Na(+)/Ca(+) antiporter 3865 50.45 +1 4730762..4732852 + 696 157963695 - Spea_3884 - ATP-dependent DNA helicase RecG 3866 48.96 +1 4732994..4733857 + 287 157963696 - Spea_3885 - hypothetical protein 3867 50.14 +1 4734113..4734838 + 241 157963697 - Spea_3886 - hypothetical protein 3868 48.84 +1 4734831..4735649 + 272 157963698 - Spea_3887 - phospholipid/glycerol acyltransferase 3869 41.96 0 4735646..4735900 + 84 157963699 - Spea_3888 - acyl carrier protein, putative 3870 42.17 0 4735909..4736157 + 82 157963700 - Spea_3889 - acyl carrier protein 3871 47.36 0 4736157..4736705 + 182 157963701 - Spea_3890 - hypothetical protein 3872 51.09 +1 4736702..4738081 + 459 157963702 - Spea_3891 - hypothetical protein 3873 48.06 0 4738078..4738464 + 128 157963703 - Spea_3892 - Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 3874 49.54 +1 4738464..4740221 + 585 157963704 - Spea_3893 - glycosyl transferase family protein 3875 50.80 +1 4740218..4741780 + 520 157963705 - Spea_3894 - histidine ammonia-lyase 3876 46.89 0 4741780..4742229 + 149 157963706 - Spea_3895 - 4-hydroxybenzoyl-CoA thioesterase 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0