IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3771	 40.87	-1	4604704..4604955	-	83	157963601	-	Spea_3789	-	hypothetical protein
3772	 45.06	0	4605294..4605779	+	161	157963602	-	Spea_3790	-	ribonuclease activity regulator protein RraA
3773	 50.92	+1	4605923..4606957	+	344	157963603	-	Spea_3791	-	arginase/agmatinase/formiminoglutamase
3774	 41.53	-1	4607161..4607916	+	251	157963604	-	Spea_3792	-	ubiquinone/menaquinone biosynthesis methyltransferase
3775	 45.99	0	4607928..4608551	+	207	157963605	-	Spea_3793	-	sterol-binding domain-containing protein
3776	 46.00	0	4608548..4610197	+	549	157963606	-	Spea_3794	-	2-polyprenylphenol 6-hydroxylase
3777	 42.22	0	4610258..4610527	+	89	157963607	-	Spea_3795	-	twin arginine-targeting protein translocase
3778	 44.19	0	4610534..4610929	+	131	157963608	-	Spea_3796	-	twin-arginine translocation protein, TatB subunit
3779	 44.23	0	4610933..4611694	+	253	157963609	-	Spea_3797	-	Sec-independent protein translocase, TatC subunit
3780	 43.06	0	4611885..4612388	+	167	157963610	-	Spea_3798	-	hypothetical protein
3781	 45.79	0	4612388..4613182	+	264