IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3762	 47.57	0	4596519..4597094	+	191	157963592	-	Spea_3780	-	sporulation domain-containing protein
3763	 44.76	0	4597245..4597769	+	174	157963593	-	Spea_3781	-	ATP-dependent protease peptidase subunit
3764	 46.76	0	4597819..4599144	+	441	157963594	-	Spea_3782	-	ATP-dependent protease ATP-binding subunit
3765	 44.95	0	4599274..4599669	+	131	157963595	-	Spea_3783	-	hypothetical protein
3766	 48.65	+1	4599888..4600592	+	234	157963596	-	Spea_3784	-	purine nucleoside phosphorylase
3767	 47.23	0	4600689..4601861	+	390	157963597	-	Spea_3785	-	hypothetical protein
3768	 44.49	0	4602071..4602742	-	223	157963598	-	Spea_3786	-	cyclic nucleotide-binding protein
3769	 49.05	+1	4602924..4603979	-	351	157963599	-	Spea_3787	-	hypothetical protein
3770	 47.45	0	4603988..4604497	-	169	157963600	-	Spea_3788	-	phosphoesterase PA-phosphatase related
3771	 40.87	-1	4604704..4604955	-	83	157963601	-	Spea_3789	-	hypothetical protein
3772	 45.06	0	4605294..4605779	+	161	157963