IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3756	 45.96	0	4588590..4589840	-	416	157963586	-	Spea_3774	-	malate dehydrogenase
3757	 42.89	0	4590045..4590818	-	257	157963587	-	Spea_3775	-	nuclease
3758	 42.25	0	4591015..4591227	-	70	157963588	-	Spea_3776	-	50S ribosomal protein L31
3759	 46.23	0	4591447..4592175	-	242	157963589	-	Spea_3777	-	hypothetical protein
3760	 50.32	+1	4592443..4594638	+	731	157963590	-	Spea_3778	-	primosomal protein N'
3761	 46.33	0	4594763..4596508	+	581	157963591	-	Spea_3779	-	arginyl-tRNA synthetase
3762	 47.57	0	4596519..4597094	+	191	157963592	-	Spea_3780	-	sporulation domain-containing protein
3763	 44.76	0	4597245..4597769	+	174	157963593	-	Spea_3781	-	ATP-dependent protease peptidase subunit
3764	 46.76	0	4597819..4599144	+	441	157963594	-	Spea_3782	-	ATP-dependent protease ATP-binding subunit
3765	 44.95	0	4599274..4599669	+	131	157963595	-	Spea_3783	-	hypothetical protein
3766	 48.65	+1	4599888..4600592	+	234	157963596	-	Spea_3784	-	purine nucleoside phosph