version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3742 41.24 -1 4574362..4574892 - 176 157963572 - Spea_3760 - methylation site containing protein 3743 42.27 0 4574913..4575449 - 178 157963573 - Spea_3761 - MSHA pilin protein MshA 3744 45.48 0 4575587..4576195 - 202 157963574 - Spea_3762 - methylation site containing protein 3745 46.14 0 4576275..4576766 - 163 157963575 - Spea_3763 - hypothetical protein 3746 47.58 0 4576785..4578005 - 406 157963576 - Spea_3764 - type II secretion system protein 3747 48.56 +1 4578008..4579741 - 577 157963577 - Spea_3765 - type II secretion system protein E 3748 47.16 0 4579741..4581027 - 428 157963578 - Spea_3766 - TPR repeat-containing protein 3749 47.85 0 4581024..4581932 - 302 157963579 - Spea_3767 - MSHA biogenesis protein MshM 3750 47.46 0 4581935..4583605 - 556 157963580 - Spea_3768 - pilus (MSHA type) biogenesis protein MshL 3751 40.71 -1 4583607..4583945 - 112 157963581 - Spea_3769 - hypothetical protein 3752 41.86 -1 4583926..4584582 - 218 157963582 - Spea_3770 - MSHA biogenesis protein MshJ 3753 44.66 0 4584579..4585187 - 202 157963583 - Spea_3771 - fimbrial assembly family protein 3754 43.54 0 4585184..4586065 - 293 157963584 - Spea_3772 - biogenesis protein MshI 3755 45.34 0 4586457..4588364 - 635 157963585 - Spea_3773 - regulatory protein CsrD 3756 45.96 0 4588590..4589840 - 416 157963586 - Spea_3774 - malate dehydrogenase 3757 42.89 0 4590045..4590818 - 257 157963587 - Spea_3775 - nuclease 3758 42.25 0 4591015..4591227 - 70 157963588 - Spea_3776 - 50S ribosomal protein L31 3759 46.23 0 4591447..4592175 - 242 157963589 - Spea_3777 - hypothetical protein 3760 50.32 +1 4592443..4594638 + 731 157963590 - Spea_3778 - primosomal protein N' 3761 46.33 0 4594763..4596508 + 581 157963591 - Spea_3779 - arginyl-tRNA synthetase 3762 47.57 0 4596519..4597094 + 191 157963592 - Spea_3780 - sporulation domain-containing protein 3763 44.76 0 4597245..4597769 + 174 157963593 - Spea_3781 - ATP-dependent protease peptidase subunit 3764 46.76 0 4597819..4599144 + 441 157963594 - Spea_3782 - ATP-dependent protease ATP-binding subunit 3765 44.95 0 4599274..4599669 + 131 157963595 - Spea_3783 - hypothetical protein 3766 48.65 +1 4599888..4600592 + 234 157963596 - Spea_3784 - purine nucleoside phosphorylase 3767 47.23 0 4600689..4601861 + 390 157963597 - Spea_3785 - hypothetical protein 3768 44.49 0 4602071..4602742 - 223 157963598 - Spea_3786 - cyclic nucleotide-binding protein 3769 49.05 +1 4602924..4603979 - 351 157963599 - Spea_3787 - hypothetical protein 3770 47.45 0 4603988..4604497 - 169 157963600 - Spea_3788 - phosphoesterase PA-phosphatase related 3771 40.87 -1 4604704..4604955 - 83 157963601 - Spea_3789 - hypothetical protein 3772 45.06 0 4605294..4605779 + 161 157963602 - Spea_3790 - ribonuclease activity regulator protein RraA 3773 50.92 +1 4605923..4606957 + 344 157963603 - Spea_3791 - arginase/agmatinase/formiminoglutamase 3774 41.53 -1 4607161..4607916 + 251 157963604 - Spea_3792 - ubiquinone/menaquinone biosynthesis methyltransferase 3775 45.99 0 4607928..4608551 + 207 157963605 - Spea_3793 - sterol-binding domain-containing protein 3776 46.00 0 4608548..4610197 + 549 157963606 - Spea_3794 - 2-polyprenylphenol 6-hydroxylase 3777 42.22 0 4610258..4610527 + 89 157963607 - Spea_3795 - twin arginine-targeting protein translocase 3778 44.19 0 4610534..4610929 + 131 157963608 - Spea_3796 - twin-arginine translocation protein, TatB subunit 3779 44.23 0 4610933..4611694 + 253 157963609 - Spea_3797 - Sec-independent protein translocase, TatC subunit 3780 43.06 0 4611885..4612388 + 167 157963610 - Spea_3798 - hypothetical protein 3781 45.79 0 4612388..4613182 + 264 157963611 - Spea_3799 - TatD-related deoxyribonuclease 3782 42.12 0 4613182..4615047 + 621 157963612 - Spea_3800 - diguanylate cyclase 3783 45.80 0 4615072..4616082 + 336 157963613 - Spea_3801 - delta-aminolevulinic acid dehydratase 3784 44.86 0 4623827..4626550 - 907 157963614 - Spea_3803 - preprotein translocase subunit SecA 3785 44.89 0 4626611..4627510 - 299 157963615 - Spea_3804 - peptidase M23B 3786 43.93 0 4627538..4627990 + 150 157963616 - Spea_3805 - hypothetical protein 3787 43.76 0 4627998..4628918 - 306 157963617 - Spea_3806 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3788 47.81 0 4629096..4630283 - 395 157963618 - Spea_3807 - cell division protein FtsZ 3789 48.54 +1 4630315..4631550 - 411 157963619 - Spea_3808 - cell division protein FtsA 3790 45.88 0 4631554..4632342 - 262 157963620 - Spea_3809 - polypeptide-transport-associated domain-containing protein 3791 48.78 +1 4632424..4633893 - 489 157963621 - Spea_3810 - UDP-N-acetylmuramate--alanine ligase 3792 48.63 +1 4633895..4634992 - 365 157963622 - Spea_3811 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 3793 47.54 0 4635004..4636221 - 405 157963623 - Spea_3812 - cell division protein FtsW 3794 49.17 +1 4636211..4637530 - 439 157963624 - Spea_3813 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 3795 47.00 0 4637581..4638663 - 360 157963625 - Spea_3814 - phospho-N-acetylmuramoyl-pentapeptide-transferase 3796 47.75 0 4638663..4640042 - 459 157963626 - Spea_3815 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 3797 49.49 +1 4640039..4641505 - 488 157963627 - Spea_3816 - UDP-N-acetylmuramyl-tripeptide synthetase 3798 47.21 0 4641505..4643241 - 578 157963628 - Spea_3817 - peptidoglycan glycosyltransferase 3799 45.08 0 4643238..4643552 - 104 157963629 - Spea_3818 - cell division protein FtsL 3800 49.05 +1 4643569..4644516 - 315 157963630 - Spea_3819 - S-adenosyl-methyltransferase MraW 3801 47.28 0 4644547..4645005 - 152 157963631 - Spea_3820 - cell division protein MraZ 3802 44.64 0 4645522..4645866 + 114 157963632 - Spea_3821 - hypothetical protein 3803 49.06 +1 4645886..4647367 - 493 157963633 - Spea_3822 - glycerol kinase 3804 44.01 0 4647380..4647913 - 177 157963634 - Spea_3823 - hypothetical protein 3805 45.53 0 4648523..4649809 - 428 157963635 - Spea_3824 - membrane protein involved in aromatic hydrocarbon degradation 3806 44.55 0 4650323..4650928 - 201 157963636 - Spea_3825 - isopropylmalate isomerase small subunit 3807 50.61 +1 4650938..4652338 - 466 157963637 - Spea_3826 - isopropylmalate isomerase large subunit 3808 49.13 +1 4652341..4653435 - 364 157963638 - Spea_3827 - 3-isopropylmalate dehydrogenase 3809 47.96 0 4653521..4655092 - 523 157963639 - Spea_3828 - 2-isopropylmalate synthase 3810 43.33 0 4655617..4657407 + 596 157963640 - Spea_3829 - response regulator receiver protein 3811 49.62 +1 4657473..4659296 - 607 157963641 - Spea_3830 - ATP-dependent DNA helicase RecQ 3812 47.31 0 4659468..4659932 + 154 157963642 - Spea_3831 - hypothetical protein 3813 46.17 0 4660109..4660996 + 295 157963643 - Spea_3832 - transporter DMT superfamily protein 3814 43.86 0 4661049..4661561 - 170 157963644 - Spea_3833 - hypothetical protein 3815 47.54 0 4661631..4662953 - 440 157963645 - Spea_3834 - N-acetylglutamate synthase 3816 36.78 -2 4663527..4663700 - 57 157963646 - Spea_3835 - 50S ribosomal protein L33 3817 43.88 0 4663707..4663943 - 78 157963647 - Spea_3836 - ribosomal protein L28 3818 42.04 0 4664069..4664746 - 225 157963648 - Spea_3837 - DNA repair protein RadC 3819 51.59 +1 4664896..4666089 + 397 157963649 - Spea_3838 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 3820 48.37 0 4666089..4666547 + 152 157963650 - Spea_3839 - deoxyuridine 5'-triphosphate nucleotidohydrolase 3821 46.80 0 4666647..4667240 + 197 157963651 - Spea_3840 - nucleoid occlusion protein 3822 44.38 0 4667377..4669341 + 654 157963652 - Spea_3841 - peptidase S9 prolyl oligopeptidase 3823 48.64 +1 4669611..4670270 + 219 157963653 - Spea_3842 - GTP cyclohydrolase I 3824 47.51 0 4670794..4671435 - 213 157963654 - Spea_3843 - orotate phosphoribosyltransferase 3825 48.04 0 4671555..4672268 - 237 157963655 - Spea_3844 - ribonuclease PH 3826 48.96 +1 4672541..4673404 + 287 157963656 - Spea_3845 - hypothetical protein 3827 42.95 0 4673505..4674824 - 439 157963657 - Spea_3846 - HipA domain-containing protein 3828 45.04 0 4674824..4675105 - 93 157963658 - Spea_3847 - helix-turn-helix domain-containing protein 3829 49.24 +1 4675467..4675730 + 87 157963659 - Spea_3848 - hypothetical protein 3830 41.72 -1 4675864..4677174 - 436 157963660 - Spea_3849 - hypothetical protein 3831 46.43 0 4677747..4678586 + 279 157963661 - Spea_3850 - purine phosphorylase family 1 3832 47.75 0 4678747..4680015 + 422 157963662 - Spea_3851 - nucleoside transporter 3833 41.04 -1 4680141..4683110 - 989 157963663 - Spea_3852 - hypothetical protein 3834 46.39 0 4683269..4683919 - 216 157963664 - Spea_3853 - GntR family transcriptional regulator 3835 45.96 0 4684001..4684903 - 300 157963665 - Spea_3854 - LysR family transcriptional regulator 3836 48.56 +1 4684997..4686178 - 393 157963666 - Spea_3855 - D-galactarate dehydratase/Altronate hydrolase domain-containing protein 3837 43.15 0 4686175..4686510 - 111 157963667 - Spea_3856 - D-galactarate dehydratase 3838 45.90 0 4686977..4688623 + 548 157963668 - Spea_3857 - putative transporter 3839 50.45 +1 4688627..4689748 + 373 157963669 - Spea_3858 - mandelate racemase/muconate lactonizing protein 3840 49.54 +1 4690418..4691281 + 287 157963670 - Spea_3859 - cytochrome C family protein 3841 49.19 +1 4691291..4693012 + 573 157963671 - Spea_3860 - hypothetical protein 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0