IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3733	 47.74	0	4564171..4564767	-	198	157963563	-	Spea_3751	-	maf protein
3734	 45.81	0	4564847..4565335	-	162	157963564	-	Spea_3752	-	rod shape-determining protein MreD
3735	 48.20	0	4565332..4566219	-	295	157963565	-	Spea_3753	-	rod shape-determining protein MreC
3736	 48.29	0	4566261..4567310	-	349	157963566	-	Spea_3754	-	cell shape determining protein MreB
3737	 46.44	0	4567483..4571631	-	1382	157963567	-	Spea_3755	-	PA14 domain-containing protein
3738	 47.90	0	4571624..4572124	-	166	157963568	-	Spea_3756	-	MSHA biogenesis protein MshP
3739	 48.20	0	4572114..4573001	-	295	157963569	-	Spea_3757	-	methylation site containing protein
3740	 46.70	0	4573001..4573576	-	191	157963570	-	Spea_3758	-	methylation site containing protein
3741	 49.06	+1	4573563..4574039	-	158	157963571	-	Spea_3759	-	MSHA pilin protein MshC
3742	 41.24	-1	4574362..4574892	-	176	157963572	-	Spea_3760	-	methylation site containing protein
3743	 42.27	0	4574913..4575449	-	178	157963