IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3723	 39.59	-1	4547231..4547773	+	180	157963553	-	Spea_3741	-	hypothetical protein
3724	 46.99	0	4547931..4550486	+	851	157963554	-	Spea_3742	-	Ig domain-containing protein
3725	 48.23	0	4551044..4552198	-	384	157963555	-	Spea_3743	-	ABC-2 type transporter
3726	 47.94	0	4552200..4553363	-	387	157963556	-	Spea_3744	-	ABC-2 type transporter
3727	 51.13	+1	4553394..4554365	-	323	157963557	-	Spea_3745	-	secretion protein HlyD family protein
3728	 50.43	+1	4554355..4555746	-	463	157963558	-	Spea_3746	-	outer membrane efflux protein
3729	 50.54	+1	4555864..4557345	-	493	157963559	-	Spea_3747	-	peptidase U62 modulator of DNA gyrase
3730	 52.02	+2	4557422..4558261	-	279	157963560	-	Spea_3748	-	Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
3731	 49.00	+1	4558185..4562504	-	1439	157963561	-	Spea_3749	-	hypothetical protein
3732	 46.92	0	4562504..4564012	-	502	157963562	-	Spea_3750	-	ribonuclease G
3733	 47.74	0	4564171..4564767	-	198	157963563