IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3713	 43.96	0	4536082..4536354	+	90	157963543	-	Spea_3731	-	histone family protein DNA-binding protein
3714	 45.02	0	4536602..4537294	+	230	157963544	-	Spea_3732	-	hypothetical protein
3715	 44.44	0	4537627..4537806	+	59	157963545	-	Spea_3733	-	hypothetical protein
3716	 47.90	0	4537898..4539277	-	459	157963546	-	Spea_3734	-	amino acid carrier protein
3717	 47.33	0	4539764..4540978	-	404	157963547	-	Spea_3735	-	major facilitator transporter
3718	 48.52	+1	4541128..4542141	-	337	157963548	-	Spea_3736	-	glyceraldehyde-3-phosphate dehydrogenase, type I
3719	 45.09	0	4542253..4543290	-	345	157963549	-	Spea_3737	-	arsenical-resistance protein
3720	 45.58	0	4543336..4543686	-	116	157963550	-	Spea_3738	-	ArsR family transcriptional regulator
3721	 45.99	0	4543915..4545162	+	415	157963551	-	Spea_3739	-	PGAP1 family protein
3722	 47.87	0	4545683..4547065	-	460	157963552	-	Spea_3740	-	peptidase U62 modulator of DNA gyrase
3723	 39.59	-1	4547231..4547773	+	180	15