IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
327	 46.12	0	367542..367940	-	132	157960157	-	Spea_0328	-	hypothetical protein
328	 46.27	0	368228..369178	-	316	157960158	-	Spea_0329	-	phospholipid/glycerol acyltransferase
329	 44.26	0	369186..370091	-	301	157960159	-	Spea_0330	-	phospholipid/glycerol acyltransferase
330	 42.42	0	370305..371834	-	509	157960160	-	Spea_0331	-	EAL domain-containing protein
331	 52.07	+2	372147..373667	-	506	157960161	-	Spea_0332	-	Mg chelatase, subunit ChlI
332	 37.53	-2	374320..376035	+	571	157960162	-	Spea_0333	-	KAP P-loop domain-containing protein
333	 45.27	0	376866..378122	-	418	157960163	-	Spea_0334	-	histidine kinase
334	 48.88	+1	378094..378762	-	222	157960164	-	Spea_0335	-	two component transcriptional regulator
335	 44.53	0	378856..380070	+	404	157960165	-	Spea_0336	-	hypothetical protein
336	 46.72	0	380368..381921	+	517	157960166	-	Spea_0337	-	methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
337	 46.22	0	382112..383764	-	550	157960167	-	Spea_033