version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3697 50.65 +1 4520710..4521633 - 307 157963527 - Spea_3715 - periplasmic solute binding protein 3698 49.58 +1 4521617..4522804 - 395 157963528 - Spea_3716 - hypothetical protein 3699 47.87 0 4522881..4523162 - 93 157963529 - Spea_3717 - hypothetical protein 3700 38.10 -2 4523599..4523934 - 111 157963530 - Spea_3718 - hypothetical protein 3701 44.16 0 4524112..4525728 + 538 157963531 - Spea_3719 - MscS mechanosensitive ion channel 3702 49.74 +1 4525807..4527519 - 570 157963532 - Spea_3720 - formate--tetrahydrofolate ligase 3703 47.40 0 4528026..4528892 - 288 157963533 - Spea_3721 - dehydratase 3704 47.68 0 4528997..4529881 - 294 157963534 - Spea_3722 - GumN family protein 3705 45.83 0 4529927..4530238 + 103 157963535 - Spea_3723 - hypothetical protein 3706 44.00 0 4530343..4532085 + 580 157963536 - Spea_3724 - diguanylate cyclase/phosphodiesterase 3707 43.81 0 4532149..4532673 - 174 157963537 - Spea_3725 - hypothetical protein 3708 44.77 0 4532953..4533258 + 101 157963538 - Spea_3726 - hypothetical protein 3709 44.01 0 4533559..4533867 + 102 157963539 - Spea_3727 - hypothetical protein 3710 46.86 0 4533981..4534490 - 169 157963540 - Spea_3728 - hypothetical protein 3711 45.96 0 4534657..4535052 + 131 157963541 - Spea_3729 - hypothetical protein 3712 46.49 0 4535148..4535945 + 265 157963542 - Spea_3730 - response regulator receiver protein 3713 43.96 0 4536082..4536354 + 90 157963543 - Spea_3731 - histone family protein DNA-binding protein 3714 45.02 0 4536602..4537294 + 230 157963544 - Spea_3732 - hypothetical protein 3715 44.44 0 4537627..4537806 + 59 157963545 - Spea_3733 - hypothetical protein 3716 47.90 0 4537898..4539277 - 459 157963546 - Spea_3734 - amino acid carrier protein 3717 47.33 0 4539764..4540978 - 404 157963547 - Spea_3735 - major facilitator transporter 3718 48.52 +1 4541128..4542141 - 337 157963548 - Spea_3736 - glyceraldehyde-3-phosphate dehydrogenase, type I 3719 45.09 0 4542253..4543290 - 345 157963549 - Spea_3737 - arsenical-resistance protein 3720 45.58 0 4543336..4543686 - 116 157963550 - Spea_3738 - ArsR family transcriptional regulator 3721 45.99 0 4543915..4545162 + 415 157963551 - Spea_3739 - PGAP1 family protein 3722 47.87 0 4545683..4547065 - 460 157963552 - Spea_3740 - peptidase U62 modulator of DNA gyrase 3723 39.59 -1 4547231..4547773 + 180 157963553 - Spea_3741 - hypothetical protein 3724 46.99 0 4547931..4550486 + 851 157963554 - Spea_3742 - Ig domain-containing protein 3725 48.23 0 4551044..4552198 - 384 157963555 - Spea_3743 - ABC-2 type transporter 3726 47.94 0 4552200..4553363 - 387 157963556 - Spea_3744 - ABC-2 type transporter 3727 51.13 +1 4553394..4554365 - 323 157963557 - Spea_3745 - secretion protein HlyD family protein 3728 50.43 +1 4554355..4555746 - 463 157963558 - Spea_3746 - outer membrane efflux protein 3729 50.54 +1 4555864..4557345 - 493 157963559 - Spea_3747 - peptidase U62 modulator of DNA gyrase 3730 52.02 +2 4557422..4558261 - 279 157963560 - Spea_3748 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3731 49.00 +1 4558185..4562504 - 1439 157963561 - Spea_3749 - hypothetical protein 3732 46.92 0 4562504..4564012 - 502 157963562 - Spea_3750 - ribonuclease G 3733 47.74 0 4564171..4564767 - 198 157963563 - Spea_3751 - maf protein 3734 45.81 0 4564847..4565335 - 162 157963564 - Spea_3752 - rod shape-determining protein MreD 3735 48.20 0 4565332..4566219 - 295 157963565 - Spea_3753 - rod shape-determining protein MreC 3736 48.29 0 4566261..4567310 - 349 157963566 - Spea_3754 - cell shape determining protein MreB 3737 46.44 0 4567483..4571631 - 1382 157963567 - Spea_3755 - PA14 domain-containing protein 3738 47.90 0 4571624..4572124 - 166 157963568 - Spea_3756 - MSHA biogenesis protein MshP 3739 48.20 0 4572114..4573001 - 295 157963569 - Spea_3757 - methylation site containing protein 3740 46.70 0 4573001..4573576 - 191 157963570 - Spea_3758 - methylation site containing protein 3741 49.06 +1 4573563..4574039 - 158 157963571 - Spea_3759 - MSHA pilin protein MshC 3742 41.24 -1 4574362..4574892 - 176 157963572 - Spea_3760 - methylation site containing protein 3743 42.27 0 4574913..4575449 - 178 157963573 - Spea_3761 - MSHA pilin protein MshA 3744 45.48 0 4575587..4576195 - 202 157963574 - Spea_3762 - methylation site containing protein 3745 46.14 0 4576275..4576766 - 163 157963575 - Spea_3763 - hypothetical protein 3746 47.58 0 4576785..4578005 - 406 157963576 - Spea_3764 - type II secretion system protein 3747 48.56 +1 4578008..4579741 - 577 157963577 - Spea_3765 - type II secretion system protein E 3748 47.16 0 4579741..4581027 - 428 157963578 - Spea_3766 - TPR repeat-containing protein 3749 47.85 0 4581024..4581932 - 302 157963579 - Spea_3767 - MSHA biogenesis protein MshM 3750 47.46 0 4581935..4583605 - 556 157963580 - Spea_3768 - pilus (MSHA type) biogenesis protein MshL 3751 40.71 -1 4583607..4583945 - 112 157963581 - Spea_3769 - hypothetical protein 3752 41.86 -1 4583926..4584582 - 218 157963582 - Spea_3770 - MSHA biogenesis protein MshJ 3753 44.66 0 4584579..4585187 - 202 157963583 - Spea_3771 - fimbrial assembly family protein 3754 43.54 0 4585184..4586065 - 293 157963584 - Spea_3772 - biogenesis protein MshI 3755 45.34 0 4586457..4588364 - 635 157963585 - Spea_3773 - regulatory protein CsrD 3756 45.96 0 4588590..4589840 - 416 157963586 - Spea_3774 - malate dehydrogenase 3757 42.89 0 4590045..4590818 - 257 157963587 - Spea_3775 - nuclease 3758 42.25 0 4591015..4591227 - 70 157963588 - Spea_3776 - 50S ribosomal protein L31 3759 46.23 0 4591447..4592175 - 242 157963589 - Spea_3777 - hypothetical protein 3760 50.32 +1 4592443..4594638 + 731 157963590 - Spea_3778 - primosomal protein N' 3761 46.33 0 4594763..4596508 + 581 157963591 - Spea_3779 - arginyl-tRNA synthetase 3762 47.57 0 4596519..4597094 + 191 157963592 - Spea_3780 - sporulation domain-containing protein 3763 44.76 0 4597245..4597769 + 174 157963593 - Spea_3781 - ATP-dependent protease peptidase subunit 3764 46.76 0 4597819..4599144 + 441 157963594 - Spea_3782 - ATP-dependent protease ATP-binding subunit 3765 44.95 0 4599274..4599669 + 131 157963595 - Spea_3783 - hypothetical protein 3766 48.65 +1 4599888..4600592 + 234 157963596 - Spea_3784 - purine nucleoside phosphorylase 3767 47.23 0 4600689..4601861 + 390 157963597 - Spea_3785 - hypothetical protein 3768 44.49 0 4602071..4602742 - 223 157963598 - Spea_3786 - cyclic nucleotide-binding protein 3769 49.05 +1 4602924..4603979 - 351 157963599 - Spea_3787 - hypothetical protein 3770 47.45 0 4603988..4604497 - 169 157963600 - Spea_3788 - phosphoesterase PA-phosphatase related 3771 40.87 -1 4604704..4604955 - 83 157963601 - Spea_3789 - hypothetical protein 3772 45.06 0 4605294..4605779 + 161 157963602 - Spea_3790 - ribonuclease activity regulator protein RraA 3773 50.92 +1 4605923..4606957 + 344 157963603 - Spea_3791 - arginase/agmatinase/formiminoglutamase 3774 41.53 -1 4607161..4607916 + 251 157963604 - Spea_3792 - ubiquinone/menaquinone biosynthesis methyltransferase 3775 45.99 0 4607928..4608551 + 207 157963605 - Spea_3793 - sterol-binding domain-containing protein 3776 46.00 0 4608548..4610197 + 549 157963606 - Spea_3794 - 2-polyprenylphenol 6-hydroxylase 3777 42.22 0 4610258..4610527 + 89 157963607 - Spea_3795 - twin arginine-targeting protein translocase 3778 44.19 0 4610534..4610929 + 131 157963608 - Spea_3796 - twin-arginine translocation protein, TatB subunit 3779 44.23 0 4610933..4611694 + 253 157963609 - Spea_3797 - Sec-independent protein translocase, TatC subunit 3780 43.06 0 4611885..4612388 + 167 157963610 - Spea_3798 - hypothetical protein 3781 45.79 0 4612388..4613182 + 264 157963611 - Spea_3799 - TatD-related deoxyribonuclease 3782 42.12 0 4613182..4615047 + 621 157963612 - Spea_3800 - diguanylate cyclase 3783 45.80 0 4615072..4616082 + 336 157963613 - Spea_3801 - delta-aminolevulinic acid dehydratase 3784 44.86 0 4623827..4626550 - 907 157963614 - Spea_3803 - preprotein translocase subunit SecA 3785 44.89 0 4626611..4627510 - 299 157963615 - Spea_3804 - peptidase M23B 3786 43.93 0 4627538..4627990 + 150 157963616 - Spea_3805 - hypothetical protein 3787 43.76 0 4627998..4628918 - 306 157963617 - Spea_3806 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3788 47.81 0 4629096..4630283 - 395 157963618 - Spea_3807 - cell division protein FtsZ 3789 48.54 +1 4630315..4631550 - 411 157963619 - Spea_3808 - cell division protein FtsA 3790 45.88 0 4631554..4632342 - 262 157963620 - Spea_3809 - polypeptide-transport-associated domain-containing protein 3791 48.78 +1 4632424..4633893 - 489 157963621 - Spea_3810 - UDP-N-acetylmuramate--alanine ligase 3792 48.63 +1 4633895..4634992 - 365 157963622 - Spea_3811 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 3793 47.54 0 4635004..4636221 - 405 157963623 - Spea_3812 - cell division protein FtsW 3794 49.17 +1 4636211..4637530 - 439 157963624 - Spea_3813 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 3795 47.00 0 4637581..4638663 - 360 157963625 - Spea_3814 - phospho-N-acetylmuramoyl-pentapeptide-transferase 3796 47.75 0 4638663..4640042 - 459 157963626 - Spea_3815 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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