IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3696	 50.25	+1	4519808..4520599	-	263	157963526	-	Spea_3714	-	ABC-3 protein
3697	 50.65	+1	4520710..4521633	-	307	157963527	-	Spea_3715	-	periplasmic solute binding protein
3698	 49.58	+1	4521617..4522804	-	395	157963528	-	Spea_3716	-	hypothetical protein
3699	 47.87	0	4522881..4523162	-	93	157963529	-	Spea_3717	-	hypothetical protein
3700	 38.10	-2	4523599..4523934	-	111	157963530	-	Spea_3718	-	hypothetical protein
3701	 44.16	0	4524112..4525728	+	538	157963531	-	Spea_3719	-	MscS mechanosensitive ion channel
3702	 49.74	+1	4525807..4527519	-	570	157963532	-	Spea_3720	-	formate--tetrahydrofolate ligase
3703	 47.40	0	4528026..4528892	-	288	157963533	-	Spea_3721	-	dehydratase
3704	 47.68	0	4528997..4529881	-	294	157963534	-	Spea_3722	-	GumN family protein
3705	 45.83	0	4529927..4530238	+	103	157963535	-	Spea_3723	-	hypothetical protein
3706	 44.00	0	4530343..4532085	+	580	157963536	-	Spea_3724	-	diguanylate cyclase/phosphodiesterase
3707	 43.81	0	453