IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3691	 45.23	0	4515241..4516047	-	268	157963521	-	Spea_3709	-	enoyl-CoA hydratase
3692	 47.79	0	4516323..4517318	+	331	157963522	-	Spea_3710	-	CheC, inhibitor of MCP methylation
3693	 46.11	0	4517320..4518282	+	320	157963523	-	Spea_3711	-	diguanylate cyclase
3694	 43.48	0	4518384..4518797	-	137	157963524	-	Spea_3712	-	hypothetical protein
3695	 44.99	0	4518827..4519555	-	242	157963525	-	Spea_3713	-	1-acyl-sn-glycerol-3-phosphate acyltransferase
3696	 50.25	+1	4519808..4520599	-	263	157963526	-	Spea_3714	-	ABC-3 protein
3697	 50.65	+1	4520710..4521633	-	307	157963527	-	Spea_3715	-	periplasmic solute binding protein
3698	 49.58	+1	4521617..4522804	-	395	157963528	-	Spea_3716	-	hypothetical protein
3699	 47.87	0	4522881..4523162	-	93	157963529	-	Spea_3717	-	hypothetical protein
3700	 38.10	-2	4523599..4523934	-	111	157963530	-	Spea_3718	-	hypothetical protein
3701	 44.16	0	4524112..4525728	+	538	157963531	-	Spea_3719	-	MscS mechanosensitive ion channel