IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3681	 43.40	0	4500018..4500335	-	105	157963511	-	Spea_3699	-	hypothetical protein
3682	 47.72	0	4500473..4500910	-	145	157963512	-	Spea_3700	-	hypothetical protein
3683	 51.25	+1	4501060..4503465	-	801	157963513	-	Spea_3701	-	hypothetical protein
3684	 50.09	+1	4503657..4507361	-	1234	157963514	-	Spea_3702	-	PAS/PAC sensor hybrid histidine kinase
3685	 47.89	0	4507542..4508936	-	464	157963515	-	Spea_3703	-	PhoH family protein
3686	 49.02	+1	4509266..4512172	+	968	157963516	-	Spea_3704	-	ATP-dependent helicase HepA
3687	 49.63	+1	4512299..4513237	+	312	157963517	-	Spea_3705	-	hypothetical protein
3688	 41.60	-1	4513295..4513693	+	132	157963518	-	Spea_3706	-	transposase
3689	 39.71	-1	4513777..4514529	+	250	157963519	-	Spea_3707	-	integrase catalytic region
3690	 39.22	-1	4514577..4515137	-	186	157963520	-	Spea_3708	-	hypothetical protein
3691	 45.23	0	4515241..4516047	-	268	157963521	-	Spea_3709	-	enoyl-CoA hydratase
3692	 47.79	0	4516323..4517318	+