IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3672	 41.92	0	4490254..4490544	-	96	157963502	-	Spea_3690	-	co-chaperonin GroES
3673	 52.20	+2	4490794..4492155	+	453	157963503	-	Spea_3691	-	MATE efflux family protein
3674	 50.53	+1	4492257..4492913	+	218	157963504	-	Spea_3692	-	pentapeptide repeat-containing protein
3675	 48.62	+1	4493083..4493481	+	132	157963505	-	Spea_3693	-	hypothetical protein
3676	 49.53	+1	4493594..4494544	-	316	157963506	-	Spea_3694	-	LysR family transcriptional regulator
3677	 50.97	+1	4494740..4495822	+	360	157963507	-	Spea_3695	-	RND family efflux transporter MFP subunit
3678	 49.45	+1	4495885..4498962	+	1025	157963508	-	Spea_3696	-	acriflavin resistance protein
3679	 44.62	0	4499165..4499536	+	123	157963509	-	Spea_3697	-	hypothetical protein
3680	 46.61	0	4499588..4499941	+	117	157963510	-	Spea_3698	-	hypothetical protein
3681	 43.40	0	4500018..4500335	-	105	157963511	-	Spea_3699	-	hypothetical protein
3682	 47.72	0	4500473..4500910	-	145	157963512	-	Spea_3700	-	hypot