IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3662	 43.38	0	4481199..4481636	+	145	157963492	-	Spea_3680	-	hypothetical protein
3663	 43.93	0	4481991..4482962	-	323	157963493	-	Spea_3681	-	hypothetical protein
3664	 43.89	0	4482999..4483595	-	198	157963494	-	Spea_3682	-	hypothetical protein
3665	 39.00	-1	4483910..4484209	+	99	157963495	-	Spea_3683	-	hypothetical protein
3666	 43.86	0	4484231..4484401	-	56	157963496	-	Spea_3684	-	hypothetical protein
3667	 45.48	0	4484795..4485856	+	353	157963497	-	Spea_3685	-	NERD domain-containing protein
3668	 35.28	-2	4485983..4487062	+	359	157963498	-	Spea_3686	-	hypothetical protein
3669	 37.04	-2	4487059..4487409	+	116	157963499	-	Spea_3687	-	hypothetical protein
3670	 32.14	-2	4487609..4487944	+	111	157963500	-	Spea_3688	-	hypothetical protein
3671	 47.51	0	4488521..4490164	-	547	157963501	-	Spea_3689	-	chaperonin GroEL
3672	 41.92	0	4490254..4490544	-	96	157963502	-	Spea_3690	-	co-chaperonin GroES
3673	 52.20	+2	4490794..4492155	+	453