version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3659 43.26 0 4478257..4479435 - 392 157963489 - Spea_3677 - hypothetical protein 3660 43.21 0 4479729..4480295 + 188 157963490 - Spea_3678 - cold-shock DNA-binding domain-containing protein 3661 43.85 0 4480637..4481197 + 186 157963491 - Spea_3679 - hypothetical protein 3662 43.38 0 4481199..4481636 + 145 157963492 - Spea_3680 - hypothetical protein 3663 43.93 0 4481991..4482962 - 323 157963493 - Spea_3681 - hypothetical protein 3664 43.89 0 4482999..4483595 - 198 157963494 - Spea_3682 - hypothetical protein 3665 39.00 -1 4483910..4484209 + 99 157963495 - Spea_3683 - hypothetical protein 3666 43.86 0 4484231..4484401 - 56 157963496 - Spea_3684 - hypothetical protein 3667 45.48 0 4484795..4485856 + 353 157963497 - Spea_3685 - NERD domain-containing protein 3668 35.28 -2 4485983..4487062 + 359 157963498 - Spea_3686 - hypothetical protein 3669 37.04 -2 4487059..4487409 + 116 157963499 - Spea_3687 - hypothetical protein 3670 32.14 -2 4487609..4487944 + 111 157963500 - Spea_3688 - hypothetical protein 3671 47.51 0 4488521..4490164 - 547 157963501 - Spea_3689 - chaperonin GroEL 3672 41.92 0 4490254..4490544 - 96 157963502 - Spea_3690 - co-chaperonin GroES 3673 52.20 +2 4490794..4492155 + 453 157963503 - Spea_3691 - MATE efflux family protein 3674 50.53 +1 4492257..4492913 + 218 157963504 - Spea_3692 - pentapeptide repeat-containing protein 3675 48.62 +1 4493083..4493481 + 132 157963505 - Spea_3693 - hypothetical protein 3676 49.53 +1 4493594..4494544 - 316 157963506 - Spea_3694 - LysR family transcriptional regulator 3677 50.97 +1 4494740..4495822 + 360 157963507 - Spea_3695 - RND family efflux transporter MFP subunit 3678 49.45 +1 4495885..4498962 + 1025 157963508 - Spea_3696 - acriflavin resistance protein 3679 44.62 0 4499165..4499536 + 123 157963509 - Spea_3697 - hypothetical protein 3680 46.61 0 4499588..4499941 + 117 157963510 - Spea_3698 - hypothetical protein 3681 43.40 0 4500018..4500335 - 105 157963511 - Spea_3699 - hypothetical protein 3682 47.72 0 4500473..4500910 - 145 157963512 - Spea_3700 - hypothetical protein 3683 51.25 +1 4501060..4503465 - 801 157963513 - Spea_3701 - hypothetical protein 3684 50.09 +1 4503657..4507361 - 1234 157963514 - Spea_3702 - PAS/PAC sensor hybrid histidine kinase 3685 47.89 0 4507542..4508936 - 464 157963515 - Spea_3703 - PhoH family protein 3686 49.02 +1 4509266..4512172 + 968 157963516 - Spea_3704 - ATP-dependent helicase HepA 3687 49.63 +1 4512299..4513237 + 312 157963517 - Spea_3705 - hypothetical protein 3688 41.60 -1 4513295..4513693 + 132 157963518 - Spea_3706 - transposase 3689 39.71 -1 4513777..4514529 + 250 157963519 - Spea_3707 - integrase catalytic region 3690 39.22 -1 4514577..4515137 - 186 157963520 - Spea_3708 - hypothetical protein 3691 45.23 0 4515241..4516047 - 268 157963521 - Spea_3709 - enoyl-CoA hydratase 3692 47.79 0 4516323..4517318 + 331 157963522 - Spea_3710 - CheC, inhibitor of MCP methylation 3693 46.11 0 4517320..4518282 + 320 157963523 - Spea_3711 - diguanylate cyclase 3694 43.48 0 4518384..4518797 - 137 157963524 - Spea_3712 - hypothetical protein 3695 44.99 0 4518827..4519555 - 242 157963525 - Spea_3713 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 3696 50.25 +1 4519808..4520599 - 263 157963526 - Spea_3714 - ABC-3 protein 3697 50.65 +1 4520710..4521633 - 307 157963527 - Spea_3715 - periplasmic solute binding protein 3698 49.58 +1 4521617..4522804 - 395 157963528 - Spea_3716 - hypothetical protein 3699 47.87 0 4522881..4523162 - 93 157963529 - Spea_3717 - hypothetical protein 3700 38.10 -2 4523599..4523934 - 111 157963530 - Spea_3718 - hypothetical protein 3701 44.16 0 4524112..4525728 + 538 157963531 - Spea_3719 - MscS mechanosensitive ion channel 3702 49.74 +1 4525807..4527519 - 570 157963532 - Spea_3720 - formate--tetrahydrofolate ligase 3703 47.40 0 4528026..4528892 - 288 157963533 - Spea_3721 - dehydratase 3704 47.68 0 4528997..4529881 - 294 157963534 - Spea_3722 - GumN family protein 3705 45.83 0 4529927..4530238 + 103 157963535 - Spea_3723 - hypothetical protein 3706 44.00 0 4530343..4532085 + 580 157963536 - Spea_3724 - diguanylate cyclase/phosphodiesterase 3707 43.81 0 4532149..4532673 - 174 157963537 - Spea_3725 - hypothetical protein 3708 44.77 0 4532953..4533258 + 101 157963538 - Spea_3726 - hypothetical protein 3709 44.01 0 4533559..4533867 + 102 157963539 - Spea_3727 - hypothetical protein 3710 46.86 0 4533981..4534490 - 169 157963540 - Spea_3728 - hypothetical protein 3711 45.96 0 4534657..4535052 + 131 157963541 - Spea_3729 - hypothetical protein 3712 46.49 0 4535148..4535945 + 265 157963542 - Spea_3730 - response regulator receiver protein 3713 43.96 0 4536082..4536354 + 90 157963543 - Spea_3731 - histone family protein DNA-binding protein 3714 45.02 0 4536602..4537294 + 230 157963544 - Spea_3732 - hypothetical protein 3715 44.44 0 4537627..4537806 + 59 157963545 - Spea_3733 - hypothetical protein 3716 47.90 0 4537898..4539277 - 459 157963546 - Spea_3734 - amino acid carrier protein 3717 47.33 0 4539764..4540978 - 404 157963547 - Spea_3735 - major facilitator transporter 3718 48.52 +1 4541128..4542141 - 337 157963548 - Spea_3736 - glyceraldehyde-3-phosphate dehydrogenase, type I 3719 45.09 0 4542253..4543290 - 345 157963549 - Spea_3737 - arsenical-resistance protein 3720 45.58 0 4543336..4543686 - 116 157963550 - Spea_3738 - ArsR family transcriptional regulator 3721 45.99 0 4543915..4545162 + 415 157963551 - Spea_3739 - PGAP1 family protein 3722 47.87 0 4545683..4547065 - 460 157963552 - Spea_3740 - peptidase U62 modulator of DNA gyrase 3723 39.59 -1 4547231..4547773 + 180 157963553 - Spea_3741 - hypothetical protein 3724 46.99 0 4547931..4550486 + 851 157963554 - Spea_3742 - Ig domain-containing protein 3725 48.23 0 4551044..4552198 - 384 157963555 - Spea_3743 - ABC-2 type transporter 3726 47.94 0 4552200..4553363 - 387 157963556 - Spea_3744 - ABC-2 type transporter 3727 51.13 +1 4553394..4554365 - 323 157963557 - Spea_3745 - secretion protein HlyD family protein 3728 50.43 +1 4554355..4555746 - 463 157963558 - Spea_3746 - outer membrane efflux protein 3729 50.54 +1 4555864..4557345 - 493 157963559 - Spea_3747 - peptidase U62 modulator of DNA gyrase 3730 52.02 +2 4557422..4558261 - 279 157963560 - Spea_3748 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3731 49.00 +1 4558185..4562504 - 1439 157963561 - Spea_3749 - hypothetical protein 3732 46.92 0 4562504..4564012 - 502 157963562 - Spea_3750 - ribonuclease G 3733 47.74 0 4564171..4564767 - 198 157963563 - Spea_3751 - maf protein 3734 45.81 0 4564847..4565335 - 162 157963564 - Spea_3752 - rod shape-determining protein MreD 3735 48.20 0 4565332..4566219 - 295 157963565 - Spea_3753 - rod shape-determining protein MreC 3736 48.29 0 4566261..4567310 - 349 157963566 - Spea_3754 - cell shape determining protein MreB 3737 46.44 0 4567483..4571631 - 1382 157963567 - Spea_3755 - PA14 domain-containing protein 3738 47.90 0 4571624..4572124 - 166 157963568 - Spea_3756 - MSHA biogenesis protein MshP 3739 48.20 0 4572114..4573001 - 295 157963569 - Spea_3757 - methylation site containing protein 3740 46.70 0 4573001..4573576 - 191 157963570 - Spea_3758 - methylation site containing protein 3741 49.06 +1 4573563..4574039 - 158 157963571 - Spea_3759 - MSHA pilin protein MshC 3742 41.24 -1 4574362..4574892 - 176 157963572 - Spea_3760 - methylation site containing protein 3743 42.27 0 4574913..4575449 - 178 157963573 - Spea_3761 - MSHA pilin protein MshA 3744 45.48 0 4575587..4576195 - 202 157963574 - Spea_3762 - methylation site containing protein 3745 46.14 0 4576275..4576766 - 163 157963575 - Spea_3763 - hypothetical protein 3746 47.58 0 4576785..4578005 - 406 157963576 - Spea_3764 - type II secretion system protein 3747 48.56 +1 4578008..4579741 - 577 157963577 - Spea_3765 - type II secretion system protein E 3748 47.16 0 4579741..4581027 - 428 157963578 - Spea_3766 - TPR repeat-containing protein 3749 47.85 0 4581024..4581932 - 302 157963579 - Spea_3767 - MSHA biogenesis protein MshM 3750 47.46 0 4581935..4583605 - 556 157963580 - Spea_3768 - pilus (MSHA type) biogenesis protein MshL 3751 40.71 -1 4583607..4583945 - 112 157963581 - Spea_3769 - hypothetical protein 3752 41.86 -1 4583926..4584582 - 218 157963582 - Spea_3770 - MSHA biogenesis protein MshJ 3753 44.66 0 4584579..4585187 - 202 157963583 - Spea_3771 - fimbrial assembly family protein 3754 43.54 0 4585184..4586065 - 293 157963584 - Spea_3772 - biogenesis protein MshI 3755 45.34 0 4586457..4588364 - 635 157963585 - Spea_3773 - regulatory protein CsrD 3756 45.96 0 4588590..4589840 - 416 157963586 - Spea_3774 - malate dehydrogenase 3757 42.89 0 4590045..4590818 - 257 157963587 - Spea_3775 - nuclease 3758 42.25 0 4591015..4591227 - 70 157963588 - Spea_3776 - 50S ribosomal protein L31 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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