IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3657	 47.82	0	4473931..4474434	-	167	157963487	-	Spea_3675	-	glycine cleavage system regulatory protein-like protein
3658	 42.07	0	4475976..4478126	+	716	157963488	-	Spea_3676	-	metallophosphoesterase
3659	 43.26	0	4478257..4479435	-	392	157963489	-	Spea_3677	-	hypothetical protein
3660	 43.21	0	4479729..4480295	+	188	157963490	-	Spea_3678	-	cold-shock DNA-binding domain-containing protein
3661	 43.85	0	4480637..4481197	+	186	157963491	-	Spea_3679	-	hypothetical protein
3662	 43.38	0	4481199..4481636	+	145	157963492	-	Spea_3680	-	hypothetical protein
3663	 43.93	0	4481991..4482962	-	323	157963493	-	Spea_3681	-	hypothetical protein
3664	 43.89	0	4482999..4483595	-	198	157963494	-	Spea_3682	-	hypothetical protein
3665	 39.00	-1	4483910..4484209	+	99	157963495	-	Spea_3683	-	hypothetical protein
3666	 43.86	0	4484231..4484401	-	56	157963496	-	Spea_3684	-	hypothetical protein
3667	 45.48	0	4484795..4485856	+	353	157963497	-	Spea_3685	-	NERD domain-conta