IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3653	 42.62	0	4467837..4468493	-	218	157963483	-	Spea_3671	-	pentapeptide repeat-containing protein
3654	 38.06	-2	4469014..4470873	+	619	157963484	-	Spea_3672	-	methyl-accepting chemotaxis sensory transducer
3655	 45.10	0	4471189..4471545	+	118	157963485	-	Spea_3673	-	hypothetical protein
3656	 48.24	0	4471892..4473541	-	549	157963486	-	Spea_3674	-	BCCT transporter
3657	 47.82	0	4473931..4474434	-	167	157963487	-	Spea_3675	-	glycine cleavage system regulatory protein-like protein
3658	 42.07	0	4475976..4478126	+	716	157963488	-	Spea_3676	-	metallophosphoesterase
3659	 43.26	0	4478257..4479435	-	392	157963489	-	Spea_3677	-	hypothetical protein
3660	 43.21	0	4479729..4480295	+	188	157963490	-	Spea_3678	-	cold-shock DNA-binding domain-containing protein
3661	 43.85	0	4480637..4481197	+	186	157963491	-	Spea_3679	-	hypothetical protein
3662	 43.38	0	4481199..4481636	+	145	157963492	-	Spea_3680	-	hypothetical protein
3663	 43.93	0	4481991..4482962	-	323	157