IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3643	 43.39	0	4452358..4453680	-	440	157963473	-	Spea_3661	-	hypothetical protein
3644	 48.43	0	4454085..4455455	+	456	157963474	-	Spea_3662	-	xanthine/uracil/vitamin C permease
3645	 43.90	0	4455524..4457056	-	510	157963475	-	Spea_3663	-	integral membrane protein TerC
3646	 43.57	0	4457438..4460005	-	855	157963476	-	Spea_3664	-	hypothetical protein
3647	 48.52	+1	4460379..4461155	-	258	157963477	-	Spea_3665	-	hypothetical protein
3648	 46.62	0	4461179..4462345	-	388	157963478	-	Spea_3666	-	hypothetical protein
3649	 46.36	0	4462614..4465922	-	1102	157963479	-	Spea_3667	-	metal dependent phosphohydrolase
3650	 45.04	0	4466206..4466487	+	93	157963480	-	Spea_3668	-	hypothetical protein
3651	 45.43	0	4466598..4467002	-	134	157963481	-	Spea_3669	-	hypothetical protein
3652	 45.79	0	4467090..4467386	-	98	157963482	-	Spea_3670	-	hypothetical protein
3653	 42.62	0	4467837..4468493	-	218	157963483	-	Spea_3671	-	pentapeptide repeat-containing protein
3654