version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3627 47.45 0 4433525..4433935 + 136 157963457 - Spea_3645 - CopG family transcriptional regulator 3628 49.78 +1 4434120..4434788 + 222 157963458 - Spea_3646 - hypothetical protein 3629 45.53 0 4434861..4435352 - 163 157963459 - Spea_3647 - peptidyl-prolyl cis-trans isomerase cyclophilin type 3630 46.61 0 4435713..4437098 + 461 157963460 - Spea_3648 - aminotransferase class V 3631 44.73 0 4437204..4439573 - 789 157963461 - Spea_3649 - diguanylate cyclase/phosphodiesterase 3632 44.98 0 4439560..4440486 - 308 157963462 - Spea_3650 - extracellular solute-binding protein 3633 47.69 0 4440929..4442098 - 389 157963463 - Spea_3651 - nitric oxide reductase 3634 44.80 0 4442100..4443581 - 493 157963464 - Spea_3652 - anaerobic nitric oxide reductase flavorubredoxin 3635 49.60 +1 4443930..4445042 - 370 157963465 - Spea_3653 - cysteine synthase A 3636 47.90 0 4445229..4446464 - 411 157963466 - Spea_3654 - aminotransferase class I and II 3637 49.22 +1 4446808..4448991 - 727 157963467 - Spea_3655 - glycoside hydrolase family protein 3638 28.47 -2 4449202..4449489 - 95 157963468 - Spea_3656 - hypothetical protein 3639 45.83 0 4449630..4449893 + 87 157963469 - Spea_3657 - hypothetical protein 3640 47.38 0 4449890..4450921 + 343 157963470 - Spea_3658 - multidrug resistance efflux pump 3641 42.29 0 4451017..4451697 - 226 157963471 - Spea_3659 - response regulator receiver protein 3642 45.24 0 4451980..4452231 + 83 157963472 - Spea_3660 - hypothetical protein 3643 43.39 0 4452358..4453680 - 440 157963473 - Spea_3661 - hypothetical protein 3644 48.43 0 4454085..4455455 + 456 157963474 - Spea_3662 - xanthine/uracil/vitamin C permease 3645 43.90 0 4455524..4457056 - 510 157963475 - Spea_3663 - integral membrane protein TerC 3646 43.57 0 4457438..4460005 - 855 157963476 - Spea_3664 - hypothetical protein 3647 48.52 +1 4460379..4461155 - 258 157963477 - Spea_3665 - hypothetical protein 3648 46.62 0 4461179..4462345 - 388 157963478 - Spea_3666 - hypothetical protein 3649 46.36 0 4462614..4465922 - 1102 157963479 - Spea_3667 - metal dependent phosphohydrolase 3650 45.04 0 4466206..4466487 + 93 157963480 - Spea_3668 - hypothetical protein 3651 45.43 0 4466598..4467002 - 134 157963481 - Spea_3669 - hypothetical protein 3652 45.79 0 4467090..4467386 - 98 157963482 - Spea_3670 - hypothetical protein 3653 42.62 0 4467837..4468493 - 218 157963483 - Spea_3671 - pentapeptide repeat-containing protein 3654 38.06 -2 4469014..4470873 + 619 157963484 - Spea_3672 - methyl-accepting chemotaxis sensory transducer 3655 45.10 0 4471189..4471545 + 118 157963485 - Spea_3673 - hypothetical protein 3656 48.24 0 4471892..4473541 - 549 157963486 - Spea_3674 - BCCT transporter 3657 47.82 0 4473931..4474434 - 167 157963487 - Spea_3675 - glycine cleavage system regulatory protein-like protein 3658 42.07 0 4475976..4478126 + 716 157963488 - Spea_3676 - metallophosphoesterase 3659 43.26 0 4478257..4479435 - 392 157963489 - Spea_3677 - hypothetical protein 3660 43.21 0 4479729..4480295 + 188 157963490 - Spea_3678 - cold-shock DNA-binding domain-containing protein 3661 43.85 0 4480637..4481197 + 186 157963491 - Spea_3679 - hypothetical protein 3662 43.38 0 4481199..4481636 + 145 157963492 - Spea_3680 - hypothetical protein 3663 43.93 0 4481991..4482962 - 323 157963493 - Spea_3681 - hypothetical protein 3664 43.89 0 4482999..4483595 - 198 157963494 - Spea_3682 - hypothetical protein 3665 39.00 -1 4483910..4484209 + 99 157963495 - Spea_3683 - hypothetical protein 3666 43.86 0 4484231..4484401 - 56 157963496 - Spea_3684 - hypothetical protein 3667 45.48 0 4484795..4485856 + 353 157963497 - Spea_3685 - NERD domain-containing protein 3668 35.28 -2 4485983..4487062 + 359 157963498 - Spea_3686 - hypothetical protein 3669 37.04 -2 4487059..4487409 + 116 157963499 - Spea_3687 - hypothetical protein 3670 32.14 -2 4487609..4487944 + 111 157963500 - Spea_3688 - hypothetical protein 3671 47.51 0 4488521..4490164 - 547 157963501 - Spea_3689 - chaperonin GroEL 3672 41.92 0 4490254..4490544 - 96 157963502 - Spea_3690 - co-chaperonin GroES 3673 52.20 +2 4490794..4492155 + 453 157963503 - Spea_3691 - MATE efflux family protein 3674 50.53 +1 4492257..4492913 + 218 157963504 - Spea_3692 - pentapeptide repeat-containing protein 3675 48.62 +1 4493083..4493481 + 132 157963505 - Spea_3693 - hypothetical protein 3676 49.53 +1 4493594..4494544 - 316 157963506 - Spea_3694 - LysR family transcriptional regulator 3677 50.97 +1 4494740..4495822 + 360 157963507 - Spea_3695 - RND family efflux transporter MFP subunit 3678 49.45 +1 4495885..4498962 + 1025 157963508 - Spea_3696 - acriflavin resistance protein 3679 44.62 0 4499165..4499536 + 123 157963509 - Spea_3697 - hypothetical protein 3680 46.61 0 4499588..4499941 + 117 157963510 - Spea_3698 - hypothetical protein 3681 43.40 0 4500018..4500335 - 105 157963511 - Spea_3699 - hypothetical protein 3682 47.72 0 4500473..4500910 - 145 157963512 - Spea_3700 - hypothetical protein 3683 51.25 +1 4501060..4503465 - 801 157963513 - Spea_3701 - hypothetical protein 3684 50.09 +1 4503657..4507361 - 1234 157963514 - Spea_3702 - PAS/PAC sensor hybrid histidine kinase 3685 47.89 0 4507542..4508936 - 464 157963515 - Spea_3703 - PhoH family protein 3686 49.02 +1 4509266..4512172 + 968 157963516 - Spea_3704 - ATP-dependent helicase HepA 3687 49.63 +1 4512299..4513237 + 312 157963517 - Spea_3705 - hypothetical protein 3688 41.60 -1 4513295..4513693 + 132 157963518 - Spea_3706 - transposase 3689 39.71 -1 4513777..4514529 + 250 157963519 - Spea_3707 - integrase catalytic region 3690 39.22 -1 4514577..4515137 - 186 157963520 - Spea_3708 - hypothetical protein 3691 45.23 0 4515241..4516047 - 268 157963521 - Spea_3709 - enoyl-CoA hydratase 3692 47.79 0 4516323..4517318 + 331 157963522 - Spea_3710 - CheC, inhibitor of MCP methylation 3693 46.11 0 4517320..4518282 + 320 157963523 - Spea_3711 - diguanylate cyclase 3694 43.48 0 4518384..4518797 - 137 157963524 - Spea_3712 - hypothetical protein 3695 44.99 0 4518827..4519555 - 242 157963525 - Spea_3713 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 3696 50.25 +1 4519808..4520599 - 263 157963526 - Spea_3714 - ABC-3 protein 3697 50.65 +1 4520710..4521633 - 307 157963527 - Spea_3715 - periplasmic solute binding protein 3698 49.58 +1 4521617..4522804 - 395 157963528 - Spea_3716 - hypothetical protein 3699 47.87 0 4522881..4523162 - 93 157963529 - Spea_3717 - hypothetical protein 3700 38.10 -2 4523599..4523934 - 111 157963530 - Spea_3718 - hypothetical protein 3701 44.16 0 4524112..4525728 + 538 157963531 - Spea_3719 - MscS mechanosensitive ion channel 3702 49.74 +1 4525807..4527519 - 570 157963532 - Spea_3720 - formate--tetrahydrofolate ligase 3703 47.40 0 4528026..4528892 - 288 157963533 - Spea_3721 - dehydratase 3704 47.68 0 4528997..4529881 - 294 157963534 - Spea_3722 - GumN family protein 3705 45.83 0 4529927..4530238 + 103 157963535 - Spea_3723 - hypothetical protein 3706 44.00 0 4530343..4532085 + 580 157963536 - Spea_3724 - diguanylate cyclase/phosphodiesterase 3707 43.81 0 4532149..4532673 - 174 157963537 - Spea_3725 - hypothetical protein 3708 44.77 0 4532953..4533258 + 101 157963538 - Spea_3726 - hypothetical protein 3709 44.01 0 4533559..4533867 + 102 157963539 - Spea_3727 - hypothetical protein 3710 46.86 0 4533981..4534490 - 169 157963540 - Spea_3728 - hypothetical protein 3711 45.96 0 4534657..4535052 + 131 157963541 - Spea_3729 - hypothetical protein 3712 46.49 0 4535148..4535945 + 265 157963542 - Spea_3730 - response regulator receiver protein 3713 43.96 0 4536082..4536354 + 90 157963543 - Spea_3731 - histone family protein DNA-binding protein 3714 45.02 0 4536602..4537294 + 230 157963544 - Spea_3732 - hypothetical protein 3715 44.44 0 4537627..4537806 + 59 157963545 - Spea_3733 - hypothetical protein 3716 47.90 0 4537898..4539277 - 459 157963546 - Spea_3734 - amino acid carrier protein 3717 47.33 0 4539764..4540978 - 404 157963547 - Spea_3735 - major facilitator transporter 3718 48.52 +1 4541128..4542141 - 337 157963548 - Spea_3736 - glyceraldehyde-3-phosphate dehydrogenase, type I 3719 45.09 0 4542253..4543290 - 345 157963549 - Spea_3737 - arsenical-resistance protein 3720 45.58 0 4543336..4543686 - 116 157963550 - Spea_3738 - ArsR family transcriptional regulator 3721 45.99 0 4543915..4545162 + 415 157963551 - Spea_3739 - PGAP1 family protein 3722 47.87 0 4545683..4547065 - 460 157963552 - Spea_3740 - peptidase U62 modulator of DNA gyrase 3723 39.59 -1 4547231..4547773 + 180 157963553 - Spea_3741 - hypothetical protein 3724 46.99 0 4547931..4550486 + 851 157963554 - Spea_3742 - Ig domain-containing protein 3725 48.23 0 4551044..4552198 - 384 157963555 - Spea_3743 - ABC-2 type transporter 3726 47.94 0 4552200..4553363 - 387 157963556 - Spea_3744 - ABC-2 type transporter 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0