IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3623	 52.82	+2	4429308..4430015	-	235	157963453	-	Spea_3641	-	ABC transporter related
3624	 52.59	+2	4430009..4430839	-	276	157963454	-	Spea_3642	-	binding-protein-dependent transport systems inner membrane component
3625	 49.28	+1	4430832..4431809	-	325	157963455	-	Spea_3643	-	binding-protein-dependent transport systems inner membrane component
3626	 51.47	+1	4431806..4433338	-	510	157963456	-	Spea_3644	-	extracellular solute-binding protein
3627	 47.45	0	4433525..4433935	+	136	157963457	-	Spea_3645	-	CopG family transcriptional regulator
3628	 49.78	+1	4434120..4434788	+	222	157963458	-	Spea_3646	-	hypothetical protein
3629	 45.53	0	4434861..4435352	-	163	157963459	-	Spea_3647	-	peptidyl-prolyl cis-trans isomerase cyclophilin type
3630	 46.61	0	4435713..4437098	+	461	157963460	-	Spea_3648	-	aminotransferase class V
3631	 44.73	0	4437204..4439573	-	789	157963461	-	Spea_3649	-	diguanylate cyclase/phosphodiesterase
3632	 44.98	0	4439560..4440486	-	308	157963462	-	Spea_3650	-	extracellular solute-binding protein
3633	 47.69	0	4440929..4442098	-	389