IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3619	 44.44	0	4427213..4427536	-	107	157963449	-	Spea_3637	-	hypothetical protein
3620	 48.27	0	4427644..4428192	-	182	157963450	-	Spea_3638	-	hypothetical protein
3621	 45.70	0	4428195..4428485	-	96	157963451	-	Spea_3639	-	hypothetical protein
3622	 51.09	+1	4428728..4429324	-	198	157963452	-	Spea_3640	-	ABC transporter related
3623	 52.82	+2	4429308..4430015	-	235	157963453	-	Spea_3641	-	ABC transporter related
3624	 52.59	+2	4430009..4430839	-	276	157963454	-	Spea_3642	-	binding-protein-dependent transport systems inner membrane component
3625	 49.28	+1	4430832..4431809	-	325	157963455	-	Spea_3643	-	binding-protein-dependent transport systems inner membrane component
3626	 51.47	+1	4431806..4433338	-	510	157963456	-	Spea_3644	-	extracellular solute-binding protein
3627	 47.45	0	4433525..4433935	+	136	157963457	-	Spea_3645	-	CopG family transcriptional regulator
3628	 49.78	+1	4434120..4434788	+	222	157963458	-	Spea_3646	-	hypothetical protein
3629	 45.53	0	4434861..4435352	-	163