IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3614	 47.22	0	4421588..4422163	-	191	157963444	-	Spea_3632	-	PGAP1 family protein
3615	 48.24	0	4422365..4423417	+	350	157963445	-	Spea_3633	-	hypothetical protein
3616	 44.62	0	4424025..4425194	+	389	157963446	-	Spea_3634	-	major facilitator transporter
3617	 46.98	0	4425503..4426579	+	358	157963447	-	Spea_3635	-	23S rRNA methyluridine methyltransferase
3618	 42.38	0	4426884..4427093	+	69	157963448	-	Spea_3636	-	TOBE domain-containing protein
3619	 44.44	0	4427213..4427536	-	107	157963449	-	Spea_3637	-	hypothetical protein
3620	 48.27	0	4427644..4428192	-	182	157963450	-	Spea_3638	-	hypothetical protein
3621	 45.70	0	4428195..4428485	-	96	157963451	-	Spea_3639	-	hypothetical protein
3622	 51.09	+1	4428728..4429324	-	198	157963452	-	Spea_3640	-	ABC transporter related
3623	 52.82	+2	4429308..4430015	-	235	157963453	-	Spea_3641	-	ABC transporter related
3624	 52.59	+2	4430009..4430839	-	276	157963454	-	Spea_3642	-	binding-protein-dependent transport