IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3612	 46.44	0	4419509..4420210	+	233	157963442	-	Spea_3630	-	two component transcriptional regulator
3613	 46.07	0	4420213..4421562	+	449	157963443	-	Spea_3631	-	histidine kinase
3614	 47.22	0	4421588..4422163	-	191	157963444	-	Spea_3632	-	PGAP1 family protein
3615	 48.24	0	4422365..4423417	+	350	157963445	-	Spea_3633	-	hypothetical protein
3616	 44.62	0	4424025..4425194	+	389	157963446	-	Spea_3634	-	major facilitator transporter
3617	 46.98	0	4425503..4426579	+	358	157963447	-	Spea_3635	-	23S rRNA methyluridine methyltransferase
3618	 42.38	0	4426884..4427093	+	69	157963448	-	Spea_3636	-	TOBE domain-containing protein
3619	 44.44	0	4427213..4427536	-	107	157963449	-	Spea_3637	-	hypothetical protein
3620	 48.27	0	4427644..4428192	-	182	157963450	-	Spea_3638	-	hypothetical protein
3621	 45.70	0	4428195..4428485	-	96	157963451	-	Spea_3639	-	hypothetical protein
3622	 51.09	+1	4428728..4429324	-	198	157963452	-	Spea_3640	-	ABC transporter related
3623