IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3599	 47.54	0	4406270..4407001	+	243	157963429	-	Spea_3615	-	ABC transporter related
3600	 45.22	0	4407138..4408601	+	487	157963430	-	Spea_3616	-	RNA polymerase factor sigma-54
3601	 40.62	-1	4408632..4408919	+	95	157963431	-	Spea_3617	-	sigma 54 modulation protein/ribosomal protein S30EA
3602	 44.59	0	4408922..4409365	+	147	157963432	-	Spea_3618	-	PTS IIA-like nitrogen-regulatory protein PtsN
3603	 45.29	0	4410427..4410702	+	91	157963433	-	Spea_3621	-	phosphotransferase system, phosphocarrier protein HPr
3604	 47.77	0	4410799..4412163	+	454	157963434	-	Spea_3622	-	magnesium transporter
3605	 46.27	0	4412232..4413035	-	267	157963435	-	Spea_3623	-	hypothetical protein
3606	 50.37	+1	4413299..4413973	-	224	157963436	-	Spea_3624	-	OmpA/MotB domain-containing protein
3607	 40.54	-1	4414420..4414641	+	73	157963437	-	Spea_3625	-	transposase IS3/IS911 family protein
3608	 45.57	0	4414841..4416376	-	511	157963438	-	Spea_3626	-	FG-GAP repeat-containing protein
3609	 46.72	0	4416487..4416837	-	116