IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
316	 47.71	0	355250..356146	+	298	157960146	-	Spea_0317	-	hypothetical protein
317	 50.05	+1	356147..357073	+	308	157960147	-	Spea_0318	-	alpha/beta hydrolase fold
318	 49.16	+1	357070..358371	+	433	157960148	-	Spea_0319	-	hypothetical protein
319	 47.32	0	358368..359618	+	416	157960149	-	Spea_0320	-	hypothetical protein
320	 46.37	0	359683..360426	-	247	157960150	-	Spea_0321	-	cupin 2 domain-containing protein
321	 49.59	+1	360604..361692	-	362	157960151	-	Spea_0322	-	hypothetical protein
322	 46.84	0	361966..363105	-	379	157960152	-	Spea_0323	-	hypothetical protein
323	 49.32	+1	363153..363521	-	122	157960153	-	Spea_0324	-	tetraheme cytochrome c, putative
324	 49.48	+1	363521..365044	-	507	157960154	-	Spea_0325	-	flavocytochrome c
325	 47.10	0	365389..366180	+	263	157960155	-	Spea_0326	-	TetR family transcriptional regulator
326	 48.44	0	366353..367444	+	363	157960156	-	Spea_0327	-	branched-chain amino acid aminotransferase
327	 46.12	0	367542..367940	-	132