IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3591	 43.10	0	4400270..4400740	-	156	157963421	-	Spea_3607	-	hypothetical protein
3592	 49.75	+1	4400813..4401598	-	261	157963422	-	Spea_3608	-	hypothetical protein
3593	 48.09	0	4401585..4402397	-	270	157963423	-	Spea_3609	-	ABC transporter related
3594	 46.25	0	4402573..4403532	+	319	157963424	-	Spea_3610	-	CaCA family Na(+)/Ca(+) antiporter
3595	 46.83	0	4403579..4404556	+	325	157963425	-	Spea_3611	-	KpsF/GutQ family protein
3596	 46.20	0	4404558..4405109	+	183	157963426	-	Spea_3612	-	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
3597	 44.80	0	4405106..4405663	+	185	157963427	-	Spea_3613	-	hypothetical protein
3598	 46.48	0	4405734..4406273	+	179	157963428	-	Spea_3614	-	cell envelope biogenesis YhbN
3599	 47.54	0	4406270..4407001	+	243	157963429	-	Spea_3615	-	ABC transporter related
3600	 45.22	0	4407138..4408601	+	487	157963430	-	Spea_3616	-	RNA polymerase factor sigma-54
3601	 40.62	-1	4408632..4408919	+	95	157963431	-	Spea_3617	-	sigma