IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3577	 35.98	-2	4386835..4387023	-	62	157963407	-	Spea_3593	-	hypothetical protein
3578	 47.33	0	4387288..4387680	-	130	157963408	-	Spea_3594	-	30S ribosomal protein S9
3579	 43.52	0	4387695..4388126	-	143	157963409	-	Spea_3595	-	50S ribosomal protein L13
3580	 44.84	0	4388492..4389595	-	367	157963410	-	Spea_3596	-	AFG1 family ATPase
3581	 40.62	-1	4389886..4390242	+	118	157963411	-	Spea_3597	-	hypothetical protein
3582	 48.97	+1	4390475..4391830	+	451	157963412	-	Spea_3598	-	protease Do
3583	 45.61	0	4391967..4393049	+	360	157963413	-	Spea_3599	-	periplasmic serine protease DegS
3584	 48.41	0	4393686..4395356	-	556	157963414	-	Spea_3600	-	hypothetical protein
3585	 44.30	0	4395511..4396185	-	224	157963415	-	Spea_3601	-	response regulator receiver protein
3586	 47.74	0	4396185..4397579	-	464	157963416	-	Spea_3602	-	histidine kinase
3587	 48.14	0	4397724..4398986	-	420	157963417	-	Spea_3603	-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase
3588	 42