IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3572	 45.79	0	4379122..4381209	-	695	157963402	-	Spea_3588	-	prolyl oligopeptidase
3573	 50.07	+1	4381422..4382162	-	246	157963403	-	Spea_3589	-	23S rRNA (guanosine-2'-O-)-methyltransferase
3574	 47.72	0	4382163..4384622	-	819	157963404	-	Spea_3590	-	ribonuclease R
3575	 44.39	0	4384665..4385288	-	207	157963405	-	Spea_3591	-	Sel1 domain-containing protein
3576	 45.52	0	4385473..4386768	-	431	157963406	-	Spea_3592	-	adenylosuccinate synthetase
3577	 35.98	-2	4386835..4387023	-	62	157963407	-	Spea_3593	-	hypothetical protein
3578	 47.33	0	4387288..4387680	-	130	157963408	-	Spea_3594	-	30S ribosomal protein S9
3579	 43.52	0	4387695..4388126	-	143	157963409	-	Spea_3595	-	50S ribosomal protein L13
3580	 44.84	0	4388492..4389595	-	367	157963410	-	Spea_3596	-	AFG1 family ATPase
3581	 40.62	-1	4389886..4390242	+	118	157963411	-	Spea_3597	-	hypothetical protein
3582	 48.97	+1	4390475..4391830	+	451	157963412	-	Spea_3598	-	protease Do
3583	 45.61	0	4391967..