IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3562	 40.23	-1	4368327..4369094	-	255	157963392	-	Spea_3578	-	LuxR family transcriptional regulator
3563	 47.35	0	4369592..4370854	-	420	157963393	-	Spea_3579	-	hypothetical protein
3564	 48.00	0	4370968..4372044	-	358	157963394	-	Spea_3580	-	alanine racemase
3565	 47.12	0	4372138..4373544	-	468	157963395	-	Spea_3581	-	replicative DNA helicase
3566	 47.63	0	4373668..4375899	+	743	157963396	-	Spea_3582	-	hypothetical protein
3567	 43.27	0	4376534..4376986	-	150	157963397	-	Spea_3583	-	50S ribosomal protein L9
3568	 42.11	0	4377014..4377241	-	75	157963398	-	Spea_3584	-	ribosomal protein S18
3569	 42.81	0	4377253..4377558	-	101	157963399	-	Spea_3585	-	primosomal replication protein N
3570	 46.14	0	4377567..4377980	-	137	157963400	-	Spea_3586	-	30S ribosomal protein S6
3571	 45.03	0	4378304..4379047	+	247	157963401	-	Spea_3587	-	hypothetical protein
3572	 45.79	0	4379122..4381209	-	695	157963402	-	Spea_3588	-	prolyl oligopeptidase
3573	 50.07	+1	438142