IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
307	 49.24	+1	346748..348199	+	483	157960137	-	Spea_0308	-	hypothetical protein
308	 44.44	0	348231..348527	+	98	157960138	-	Spea_0309	-	hypothetical protein
309	 48.59	+1	348616..349644	+	342	157960139	-	Spea_0310	-	serine/threonine protein kinase
310	 45.26	0	349770..350381	+	203	157960140	-	Spea_0311	-	DSBA oxidoreductase
311	 39.91	-1	350570..350782	+	70	157960141	-	Spea_0312	-	hypothetical protein
312	 41.67	-1	350796..350999	-	67	157960142	-	Spea_0313	-	hypothetical protein
313	 48.31	0	351180..352661	+	493	157960143	-	Spea_0314	-	Na+/H+ antiporter NhaC
314	 45.41	0	352769..353389	-	206	157960144	-	Spea_0315	-	hypothetical protein
315	 47.69	0	353631..354974	+	447	157960145	-	Spea_0316	-	phospholipase
316	 47.71	0	355250..356146	+	298	157960146	-	Spea_0317	-	hypothetical protein
317	 50.05	+1	356147..357073	+	308	157960147	-	Spea_0318	-	alpha/beta hydrolase fold
318	 49.16	+1	357070..358371	+	433