IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
302	 45.04	0	339521..339913	-	130	157960132	-	Spea_0303	-	hypothetical protein
303	 45.59	0	340442..343084	+	880	157960133	-	Spea_0304	-	TonB-dependent receptor
304	 41.09	-1	343190..345226	+	678	157960134	-	Spea_0305	-	diguanylate phosphodiesterase
305	 48.16	0	345407..346249	+	280	157960135	-	Spea_0306	-	hypothetical protein
306	 48.48	+1	346417..346680	+	87	157960136	-	Spea_0307	-	hypothetical protein
307	 49.24	+1	346748..348199	+	483	157960137	-	Spea_0308	-	hypothetical protein
308	 44.44	0	348231..348527	+	98	157960138	-	Spea_0309	-	hypothetical protein
309	 48.59	+1	348616..349644	+	342	157960139	-	Spea_0310	-	serine/threonine protein kinase
310	 45.26	0	349770..350381	+	203	157960140	-	Spea_0311	-	DSBA oxidoreductase
311	 39.91	-1	350570..350782	+	70	157960141	-	Spea_0312	-	hypothetical protein
312	 41.67	-1	350796..350999	-	67	157960142	-	Spea_0313	-	hypothetical protein
313	 48.31	0	351180..352661	+	493