IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
285	 39.95	-1	320108..322765	-	885	157960115	-	Spea_0286	-	histidine kinase
286	 41.52	-1	322868..323368	+	166	157960116	-	Spea_0287	-	hypothetical protein
287	 43.26	0	323371..324408	+	345	157960117	-	Spea_0288	-	hypothetical protein
288	 41.38	-1	324408..324668	+	86	157960118	-	Spea_0289	-	hypothetical protein
289	 44.31	0	324686..325642	-	318	157960119	-	Spea_0290	-	hypothetical protein
290	 43.23	0	325724..327178	-	484	157960120	-	Spea_0291	-	hypothetical protein
291	 42.81	0	327198..327524	-	108	157960121	-	Spea_0292	-	hypothetical protein
292	 45.81	0	327573..328862	-	429	157960122	-	Spea_0293	-	hypothetical protein
293	 47.86	0	329048..330052	-	334	157960123	-	Spea_0294	-	hypothetical protein
294	 46.15	0	330042..331430	-	462	157960124	-	Spea_0295	-	hypothetical protein
295	 46.67	0	331453..332847	-	464	157960125	-	Spea_0296	-	hypothetical protein
296	 42.68	0	332858..334183	-	441