version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3251 45.36 0 4004145..4005233 - 362 157963081 - Spea_3264 - hypothetical protein 3252 45.22 0 4006097..4007728 - 543 157963082 - Spea_3266 - methyl-accepting chemotaxis sensory transducer 3253 46.25 0 4008015..4009160 - 381 157963083 - Spea_3267 - diguanylate cyclase 3254 45.78 0 4009692..4010615 - 307 157963084 - Spea_3268 - BAX protein 3255 44.44 0 4010800..4011078 - 92 157963085 - Spea_3269 - hypothetical protein 3256 38.61 -2 4011330..4011917 + 195 157963086 - Spea_3270 - GCN5-related N-acetyltransferase 3257 47.46 0 4012150..4013388 + 412 157963087 - Spea_3271 - manganese transporter NRAMP 3258 45.24 0 4013808..4015235 + 475 157963088 - Spea_3272 - citrate transporter 3259 41.95 0 4015304..4015570 - 88 157963089 - Spea_3273 - hypothetical protein 3260 44.80 0 4015714..4017126 + 470 157963090 - Spea_3274 - hypothetical protein 3261 43.34 0 4017075..4019033 - 652 157963091 - Spea_3275 - sulfatase 3262 48.43 0 4019346..4020491 - 381 157963092 - Spea_3276 - peptidase T-like protein 3263 48.74 +1 4020681..4021115 + 144 157963093 - Spea_3277 - CMP/dCMP deaminase zinc-binding 3264 41.20 -1 4021659..4022090 + 143 157963094 - Spea_3278 - hypothetical protein 3265 45.32 0 4022170..4022703 + 177 157963095 - Spea_3279 - cation antiporter 3266 44.67 0 4022700..4022999 + 99 157963096 - Spea_3280 - multiple resistance and pH regulation protein F 3267 49.24 +1 4022996..4023322 + 108 157963097 - Spea_3281 - monovalent cation/proton antiporter, MnhG/PhaG subunit 3268 47.59 0 4023415..4024452 + 345 157963098 - Spea_3282 - putative monovalent cation/H+ antiporter subunit B 3269 43.80 0 4024452..4024814 + 120 157963099 - Spea_3283 - NADH-ubiquinone oxidoreductase chain 4L 3270 50.85 +1 4024814..4026292 + 492 157963100 - Spea_3284 - putative monovalent cation/H+ antiporter subunit D 3271 50.70 +1 4026289..4027779 + 496 157963101 - Spea_3285 - NADH dehydrogenase (quinone) 3272 43.10 0 4027769..4028188 + 139 157963102 - Spea_3286 - hypothetical protein 3273 50.15 +1 4028175..4029875 + 566 157963103 - Spea_3287 - putative monovalent cation/H+ antiporter subunit D 3274 38.83 -1 4030159..4031469 + 436 157963104 - Spea_3288 - hypothetical protein 3275 41.39 -1 4032075..4032794 - 239 157963105 - Spea_3289 - hypothetical protein 3276 39.94 -1 4032794..4033429 - 211 157963106 - Spea_3290 - hypothetical protein 3277 38.53 -2 4033597..4034154 + 185 157963107 - Spea_3291 - hypothetical protein 3278 43.66 0 4034230..4034568 + 112 157963108 - Spea_3292 - hypothetical protein 3279 41.41 -1 4034878..4035372 - 164 157963109 - Spea_3293 - hypothetical protein 3280 43.06 0 4035688..4036263 + 191 157963110 - Spea_3294 - hypothetical protein 3281 41.85 -1 4036322..4037014 + 230 157963111 - Spea_3295 - hypothetical protein 3282 31.40 -2 4037281..4037850 - 189 157963112 - Spea_3296 - hypothetical protein 3283 32.20 -2 4038030..4038560 - 176 157963113 - Spea_3297 - hypothetical protein 3284 33.07 -2 4038644..4040521 - 625 157963114 - Spea_3298 - NACHT family-like NTPase 3285 42.06 0 4040831..4041472 + 213 157963115 - Spea_3299 - hypothetical protein 3286 45.78 0 4041469..4041918 - 149 157963116 - Spea_3300 - hypothetical protein 3287 50.09 +1 4042194..4045082 - 962 157963117 - Spea_3301 - glycine dehydrogenase 3288 48.72 +1 4045342..4045731 - 129 157963118 - Spea_3302 - glycine cleavage system protein H 3289 49.22 +1 4046160..4047254 - 364 157963119 - Spea_3303 - glycine cleavage system aminomethyltransferase T 3290 50.20 +1 4047593..4048813 - 406 157963120 - Spea_3304 - UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 3291 51.29 +1 4048910..4050190 - 426 157963121 - Spea_3305 - 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3292 49.48 +1 4050287..4050862 - 191 157963122 - Spea_3306 - yecA family protein 3293 43.09 0 4050895..4051140 - 81 157963123 - Spea_3307 - hypothetical protein 3294 42.37 0 4051244..4051564 + 106 157963124 - Spea_3308 - hypothetical protein 3295 44.25 0 4052297..4053148 - 283 157963125 - Spea_3309 - hypothetical protein 3296 45.22 0 4053181..4053567 - 128 157963126 - Spea_3310 - hypothetical protein 3297 49.21 +1 4053775..4054404 + 209 157963127 - Spea_3311 - 5-formyltetrahydrofolate cyclo-ligase 3298 46.38 0 4054610..4055230 + 206 157963128 - Spea_3312 - hypothetical protein 3299 44.72 0 4055275..4056012 + 245 157963129 - Spea_3313 - hypothetical protein 3300 49.78 +1 4056093..4056761 - 222 157963130 - Spea_3314 - uracil-DNA glycosylase 3301 46.06 0 4057017..4057574 + 185 157963131 - Spea_3315 - pilin, putative 3302 46.07 0 4057654..4058187 + 177 157963132 - Spea_3316 - methylation site containing protein 3303 43.30 0 4058262..4058582 + 106 157963133 - Spea_3317 - hypothetical protein 3304 47.64 0 4058662..4059276 - 204 157963134 - Spea_3318 - lysine exporter protein LysE/YggA 3305 43.09 0 4059695..4060237 + 180 157963135 - Spea_3319 - thiol:disulfide interchange protein, putative 3306 48.66 +1 4060373..4061827 + 484 157963136 - Spea_3320 - Fis family transcriptional regulator 3307 46.69 0 4062138..4063604 + 488 157963137 - Spea_3321 - cytochrome c oxidase cbb3 type accessory protein FixG 3308 47.59 0 4064078..4065676 + 532 157963138 - Spea_3322 - AMP-dependent synthetase and ligase 3309 48.51 +1 4065793..4066161 - 122 157963139 - Spea_3323 - hypothetical protein 3310 49.19 +1 4066318..4068360 - 680 157963140 - Spea_3324 - lipid ABC transporter ATPase/inner membrane protein 3311 45.61 0 4068513..4069082 - 189 157963141 - Spea_3325 - pyridoxamine 5'-phosphate oxidase-related FMN-binding 3312 44.19 0 4069120..4069644 - 174 157963142 - Spea_3326 - hypothetical protein 3313 46.44 0 4069772..4071838 - 688 157963143 - Spea_3327 - TonB-dependent heme/hemoglobin receptor family protein 3314 49.41 +1 4072167..4072925 + 252 157963144 - Spea_3328 - TonB family protein 3315 49.03 +1 4073100..4073876 + 258 157963145 - Spea_3329 - MotA/TolQ/ExbB proton channel 3316 46.38 0 4073873..4074286 + 137 157963146 - Spea_3330 - biopolymer transport protein ExbD/TolR 3317 47.07 0 4074481..4075419 + 312 157963147 - Spea_3331 - periplasmic binding protein 3318 52.02 +2 4075478..4076494 + 338 157963148 - Spea_3332 - transport system permease protein 3319 48.70 +1 4076508..4077314 + 268 157963149 - Spea_3333 - hemin importer ATP-binding subunit 3320 43.19 0 4077402..4077959 - 185 157963150 - Spea_3334 - TetR family transcriptional regulator 3321 42.88 0 4078095..4078628 + 177 157963151 - Spea_3335 - deaminase-reductase domain-containing protein 3322 46.39 0 4078765..4079262 + 165 157963152 - Spea_3336 - hypothetical protein 3323 45.36 0 4079315..4080220 - 301 157963153 - Spea_3337 - LysR family transcriptional regulator 3324 40.85 -1 4080372..4080797 + 141 157963154 - Spea_3338 - transmembrane pair domain-containing protein 3325 49.10 +1 4081047..4082486 + 479 157963155 - Spea_3339 - coproporphyrinogen III oxidase 3326 43.33 0 4082569..4082958 + 129 157963156 - Spea_3340 - hypothetical protein 3327 40.94 -1 4083261..4083431 + 56 157963157 - Spea_3341 - periplasmic nitrate reductase NapE 3328 44.95 0 4083472..4084650 + 392 157963158 - Spea_3342 - trimethylamine-N-oxide reductase c-type cytochrome TorC 3329 46.65 0 4084665..4087157 + 830 157963159 - Spea_3343 - trimethylamine-N-oxide reductase TorA 3330 45.50 0 4087154..4087819 + 221 157963160 - Spea_3344 - chaperone protein TorD 3331 47.96 0 4087918..4091034 - 1038 157963161 - Spea_3345 - Hpt sensor hybrid histidine kinase 3332 46.10 0 4091116..4092180 + 354 157963162 - Spea_3346 - periplasmic sensory protein associated with the TorRS two-component regulatory system 3333 44.73 0 4092267..4092977 - 236 157963163 - Spea_3347 - DNA-binding transcriptional regulator TorR 3334 45.53 0 4093171..4093908 - 245 157963164 - Spea_3348 - hypothetical protein 3335 45.70 0 4094050..4094874 - 274 157963165 - Spea_3349 - Ion transport protein 3336 43.10 0 4095283..4095579 - 98 157963166 - Spea_3350 - hypothetical protein 3337 49.00 +1 4095763..4096413 + 216 157963167 - Spea_3351 - membrane-flanked domain-containing protein 3338 45.81 0 4096403..4097917 + 504 157963168 - Spea_3352 - membrane-flanked domain-containing protein 3339 48.88 +1 4097920..4098498 + 192 157963169 - Spea_3353 - hypothetical protein 3340 45.05 0 4098674..4099117 - 147 157963170 - Spea_3354 - UspA domain-containing protein 3341 48.15 0 4099203..4099634 - 143 157963171 - Spea_3355 - UspA domain-containing protein 3342 45.93 0 4099763..4100143 - 126 157963172 - Spea_3356 - hypothetical protein 3343 46.99 0 4100337..4101764 + 475 157963173 - Spea_3357 - aldehyde dehydrogenase 3344 45.03 0 4101787..4102359 + 190 157963174 - Spea_3358 - TetR family transcriptional regulator 3345 44.69 0 4102730..4104094 - 454 157963175 - Spea_3360 - PAS/PAC sensor signal transduction histidine kinase 3346 49.15 +1 4104098..4105627 - 509 157963176 - Spea_3361 - two component, sigma54 specific, Fis family transcriptional regulator 3347 46.86 0 4105762..4106973 - 403 157963177 - Spea_3362 - hypothetical protein 3348 46.70 0 4107001..4108302 - 433 157963178 - Spea_3363 - hypothetical protein 3349 47.54 0 4108324..4109055 - 243 157963179 - Spea_3364 - ABC transporter related 3350 50.91 +1 4109473..4110735 - 420 157963180 - Spea_3365 - RND family efflux transporter MFP subunit 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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