IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3239	 48.25	0	3989316..3990227	-	303	157963069	-	Spea_3252	-	hypothetical protein
3240	 47.33	0	3990520..3992706	-	728	157963070	-	Spea_3253	-	hypothetical protein
3241	 42.42	0	3992926..3993156	-	76	157963071	-	Spea_3254	-	hypothetical protein
3242	 44.87	0	3993335..3994522	-	395	157963072	-	Spea_3255	-	ankyrin
3243	 48.01	0	3994737..3995138	-	133	157963073	-	Spea_3256	-	hypothetical protein
3244	 39.71	-1	3995265..3996017	-	250	157963074	-	Spea_3257	-	integrase catalytic region
3245	 41.60	-1	3996101..3996499	-	132	157963075	-	Spea_3258	-	transposase
3246	 50.32	+1	3996613..3998196	-	527	157963076	-	Spea_3259	-	Na+/H+ antiporter NhaC
3247	 39.68	-1	3998909..3999097	+	62	157963077	-	Spea_3260	-	hypothetical protein
3248	 43.81	0	3999616..3999825	+	69	157963078	-	Spea_3261	-	cold-shock DNA-binding domain-containing protein
3249	 32.86	-2	4000195..4000404	+	69	157963079	-	Spea_3262	-	hypothetical protein
3250	 44.97	0	4000859..4002826	-	655