IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3233	 47.36	0	3981385..3982539	-	384	157963063	-	Spea_3246	-	mandelate racemase/muconate lactonizing protein
3234	 46.15	0	3982544..3984142	-	532	157963064	-	Spea_3247	-	BCCT transporter
3235	 50.96	+1	3984241..3985596	-	451	157963065	-	Spea_3248	-	FAD dependent oxidoreductase
3236	 46.60	0	3985774..3986421	+	215	157963066	-	Spea_3249	-	GntR family transcriptional regulator
3237	 49.14	+1	3986699..3987394	-	231	157963067	-	Spea_3250	-	CG2839
3238	 46.81	0	3987774..3988997	+	407	157963068	-	Spea_3251	-	sodium/glutamate symporter
3239	 48.25	0	3989316..3990227	-	303	157963069	-	Spea_3252	-	hypothetical protein
3240	 47.33	0	3990520..3992706	-	728	157963070	-	Spea_3253	-	hypothetical protein
3241	 42.42	0	3992926..3993156	-	76	157963071	-	Spea_3254	-	hypothetical protein
3242	 44.87	0	3993335..3994522	-	395	157963072	-	Spea_3255	-	ankyrin
3243	 48.01	0	3994737..3995138	-	133	157963073	-	Spea_3256	-	hypothetical protein
3244	 39.71	-1	3995265..3996017