IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3227	 48.95	+1	3975003..3975860	+	285	157963057	-	Spea_3240	-	putative glutathione S-transferase YghU
3228	 46.09	0	3975935..3976420	-	161	157963058	-	Spea_3241	-	hypothetical protein
3229	 48.59	+1	3976644..3976892	-	82	157963059	-	Spea_3242	-	hypothetical protein
3230	 47.33	0	3977193..3978557	+	454	157963060	-	Spea_3243	-	guanine deaminase
3231	 49.49	+1	3978674..3980059	-	461	157963061	-	Spea_3244	-	xanthine/uracil/vitamin C permease
3232	 46.48	0	3980467..3981219	+	250	157963062	-	Spea_3245	-	SpoOM family protein
3233	 47.36	0	3981385..3982539	-	384	157963063	-	Spea_3246	-	mandelate racemase/muconate lactonizing protein
3234	 46.15	0	3982544..3984142	-	532	157963064	-	Spea_3247	-	BCCT transporter
3235	 50.96	+1	3984241..3985596	-	451	157963065	-	Spea_3248	-	FAD dependent oxidoreductase
3236	 46.60	0	3985774..3986421	+	215	157963066	-	Spea_3249	-	GntR family transcriptional regulator
3237	 49.14	+1	3986699..3987394	-	231	157963067	-	Spea_3250	-