IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3224	 42.15	0	3969372..3971117	+	581	157963054	-	Spea_3237	-	hypothetical protein
3225	 43.33	0	3971380..3972459	+	359	157963055	-	Spea_3238	-	PepSY-associated TM helix domain-containing protein
3226	 48.97	+1	3972694..3974772	+	692	157963056	-	Spea_3239	-	endothelin-converting protein 1
3227	 48.95	+1	3975003..3975860	+	285	157963057	-	Spea_3240	-	putative glutathione S-transferase YghU
3228	 46.09	0	3975935..3976420	-	161	157963058	-	Spea_3241	-	hypothetical protein
3229	 48.59	+1	3976644..3976892	-	82	157963059	-	Spea_3242	-	hypothetical protein
3230	 47.33	0	3977193..3978557	+	454	157963060	-	Spea_3243	-	guanine deaminase
3231	 49.49	+1	3978674..3980059	-	461	157963061	-	Spea_3244	-	xanthine/uracil/vitamin C permease
3232	 46.48	0	3980467..3981219	+	250	157963062	-	Spea_3245	-	SpoOM family protein
3233	 47.36	0	3981385..3982539	-	384	157963063	-	Spea_3246	-	mandelate racemase/muconate lactonizing protein
3234	 46.15	0	3982544..3984142	-	532	1579630