IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3217	 47.10	0	3960539..3960952	+	137	157963047	-	Spea_3230	-	hypothetical protein
3218	 44.27	0	3960980..3961939	-	319	157963048	-	Spea_3231	-	hypothetical protein
3219	 48.50	+1	3962085..3963554	-	489	157963049	-	Spea_3232	-	beta-lactamase domain-containing protein
3220	 43.83	0	3963814..3965004	-	396	157963050	-	Spea_3233	-	hypothetical protein
3221	 40.16	-1	3965497..3965745	+	82	157963051	-	Spea_3234	-	hypothetical protein
3222	 44.16	0	3965819..3967702	-	627	157963052	-	Spea_3235	-	curlin-associated protein
3223	 44.71	0	3968235..3969122	+	295	157963053	-	Spea_3236	-	band 7 protein
3224	 42.15	0	3969372..3971117	+	581	157963054	-	Spea_3237	-	hypothetical protein
3225	 43.33	0	3971380..3972459	+	359	157963055	-	Spea_3238	-	PepSY-associated TM helix domain-containing protein
3226	 48.97	+1	3972694..3974772	+	692	157963056	-	Spea_3239	-	endothelin-converting protein 1
3227	 48.95	+1	3975003..3975860	+	285	157963057	-	Spea_3240	-	putative glutathi