IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3210	 42.05	0	3950863..3951894	-	343	157963040	-	Spea_3223	-	diguanylate cyclase
3211	 41.35	-1	3952171..3953280	-	369	157963041	-	Spea_3224	-	putative outer membrane adhesin like proteiin
3212	 37.36	-2	3953305..3954198	-	297	157963042	-	Spea_3225	-	hypothetical protein
3213	 39.22	-1	3954297..3954941	-	214	157963043	-	Spea_3226	-	LVIVD repeat-containing protein
3214	 49.26	+1	3955205..3956749	+	514	157963044	-	Spea_3227	-	ferredoxin-dependent glutamate synthase
3215	 46.70	0	3956915..3957505	-	196	157963045	-	Spea_3228	-	HAD family hydrolase
3216	 45.07	0	3957552..3960125	-	857	157963046	-	Spea_3229	-	protein-P-II uridylyltransferase
3217	 47.10	0	3960539..3960952	+	137	157963047	-	Spea_3230	-	hypothetical protein
3218	 44.27	0	3960980..3961939	-	319	157963048	-	Spea_3231	-	hypothetical protein
3219	 48.50	+1	3962085..3963554	-	489	157963049	-	Spea_3232	-	beta-lactamase domain-containing protein
3220	 43.83	0	3963814..3965004	-	396	157963050	-	Sp