IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3200	 47.49	0	3938389..3940557	+	722	157963030	-	Spea_3213	-	extracellular solute-binding protein
3201	 48.75	+1	3940661..3941380	-	239	157963031	-	Spea_3214	-	pseudouridine synthase
3202	 50.39	+1	3941581..3942618	+	345	157963032	-	Spea_3215	-	dihydroorotase
3203	 41.74	-1	3942888..3943232	+	114	157963033	-	Spea_3216	-	hypothetical protein
3204	 48.33	0	3943326..3944105	-	259	157963034	-	Spea_3217	-	hypothetical protein
3205	 43.37	0	3944366..3944644	+	92	157963035	-	Spea_3218	-	PpiC-type peptidyl-prolyl cis-trans isomerase
3206	 46.20	0	3944934..3946013	-	359	157963036	-	Spea_3219	-	glucose sorbosone dehydrogenase
3207	 43.46	0	3946456..3948450	-	664	157963037	-	Spea_3220	-	hypothetical protein
3208	 43.43	0	3948434..3949453	-	339	157963038	-	Spea_3221	-	glutathione synthetase
3209	 41.83	-1	3949982..3950770	+	262	157963039	-	Spea_3222	-	hypothetical protein
3210	 42.05	0	3950863..3951894	-	343	157963040	-	Spea_3223	-	diguanylate cyclase
3211	 41