IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3189	 47.25	0	3924911..3927181	-	756	157963019	-	Spea_3202	-	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
3190	 46.51	0	3927359..3928261	+	300	157963020	-	Spea_3203	-	LysR family transcriptional regulator
3191	 42.25	0	3928312..3929040	-	242	157963021	-	Spea_3204	-	putative signal transduction protein
3192	 48.51	+1	3929626..3930231	-	201	157963022	-	Spea_3205	-	GDSL family lipase
3193	 45.63	0	3930329..3932182	-	617	157963023	-	Spea_3206	-	TonB-dependent receptor plug
3194	 44.60	0	3932761..3933408	-	215	157963024	-	Spea_3207	-	hypothetical protein
3195	 46.56	0	3933667..3934044	+	125	157963025	-	Spea_3208	-	CopY family transcriptional regulator
3196	 47.40	0	3934041..3935234	+	397	157963026	-	Spea_3209	-	TonB family protein
3197	 45.93	0	3935332..3936117	-	261	157963027	-	Spea_3210	-	hypothetical protein
3198	 46.74	0	3936609..3937130	-	173	157963028	-	Spea_3211	-	NADPH-dependent FMN reductase
3199	 48.10	0	3937337..3938230	+	297