IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
275	 45.02	0	307433..309118	-	561	157960105	-	Spea_0276	-	hypothetical protein
276	 47.26	0	309273..310493	-	406	157960106	-	Spea_0277	-	hypothetical protein
277	 44.77	0	310696..311106	+	136	157960107	-	Spea_0278	-	hypothetical protein
278	 48.37	0	311327..313660	+	777	157960108	-	Spea_0279	-	hypothetical protein
279	 46.89	0	313840..314193	+	117	157960109	-	Spea_0280	-	hypothetical protein
280	 44.95	0	314232..315161	-	309	157960110	-	Spea_0281	-	lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase
281	 46.32	0	315351..315935	+	194	157960111	-	Spea_0282	-	hypothetical protein
282	 49.74	+1	316110..316676	-	188	157960112	-	Spea_0283	-	hypothetical protein
283	 50.07	+1	316835..318895	-	686	157960113	-	Spea_0284	-	peptidase S9 prolyl oligopeptidase
284	 45.36	0	319053..319958	-	301	157960114	-	Spea_0285	-	hypothetical protein
285	 39.95	-1	320108..322765	-	885	157960115	-	Spea_0286	-	histidine kinase
286	 41.52	-1	322868..323368	+	166