version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3150 40.98 -1 3873495..3873821 - 108 157962980 - Spea_3163 - hypothetical protein 3151 46.11 0 3874215..3876788 - 857 157962981 - Spea_3164 - ATPase 3152 45.38 0 3877014..3877760 - 248 157962982 - Spea_3165 - hypothetical protein 3153 45.58 0 3877760..3878731 - 323 157962983 - Spea_3166 - RluA family pseudouridine synthase 3154 40.52 -1 3878809..3879615 + 268 157962984 - Spea_3167 - putative lipoprotein 3155 44.29 0 3879732..3881903 - 723 157962985 - Spea_3168 - exporter of the RND superfamily protein-like protein 3156 46.86 0 3882417..3884279 - 620 157962986 - Spea_3169 - methyl-accepting chemotaxis sensory transducer 3157 48.52 +1 3884520..3885467 + 315 157962987 - Spea_3170 - ornithine cyclodeaminase 3158 49.82 +1 3885702..3886247 + 181 157962988 - Spea_3171 - ECF subfamily RNA polymerase sigma-24 factor 3159 44.57 0 3886240..3886782 + 180 157962989 - Spea_3172 - hypothetical protein 3160 44.69 0 3886779..3887720 + 313 157962990 - Spea_3173 - hypothetical protein 3161 37.54 -2 3887808..3888710 - 300 157962991 - Spea_3174 - LysR family transcriptional regulator 3162 47.03 0 3889157..3894106 + 1649 157962992 - Spea_3175 - peptidase S8 and S53 subtilisin kexin sedolisin 3163 45.89 0 3894376..3895068 - 230 157962993 - Spea_3176 - pseudouridine synthase 3164 48.20 0 3895472..3897556 + 694 157962994 - Spea_3177 - endothelin-converting protein 1 3165 46.18 0 3897948..3898733 + 261 157962995 - Spea_3178 - hypothetical protein 3166 44.20 0 3899146..3899550 + 134 157962996 - Spea_3179 - hypothetical protein 3167 44.71 0 3899615..3900115 + 166 157962997 - Spea_3180 - hypothetical protein 3168 49.52 +1 3900419..3901042 - 207 157962998 - Spea_3181 - glutathione S-transferase domain-containing protein 3169 44.51 0 3901284..3901820 + 178 157962999 - Spea_3182 - membrane-flanked domain-containing protein 3170 47.87 0 3901981..3903129 + 382 157963000 - Spea_3183 - putative manganese transporter 3171 46.67 0 3903154..3904323 + 389 157963001 - Spea_3184 - beta-lactamase 3172 41.77 -1 3904421..3904894 + 157 157963002 - Spea_3185 - hypothetical protein 3173 49.26 +1 3905579..3907267 + 562 157963003 - Spea_3186 - malate dehydrogenase 3174 47.84 0 3907475..3908053 - 192 157963004 - Spea_3187 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3175 48.83 +1 3908137..3910407 - 756 157963005 - Spea_3188 - molybdopterin oxidoreductase 3176 39.71 -1 3911023..3911226 - 67 157963006 - Spea_3189 - hypothetical protein 3177 45.19 0 3911915..3912403 - 162 157963007 - Spea_3190 - hypothetical protein 3178 47.81 0 3912433..3912957 - 174 157963008 - Spea_3191 - phosphoesterase PA-phosphatase related 3179 44.43 0 3913143..3915026 + 627 157963009 - Spea_3192 - diguanylate cyclase 3180 43.63 0 3915263..3917146 + 627 157963010 - Spea_3193 - diguanylate cyclase 3181 48.77 +1 3917264..3918487 + 407 157963011 - Spea_3194 - putative iron-sulfur cluster binding protein 3182 43.19 0 3918554..3918766 - 70 157963012 - Spea_3195 - hypothetical protein 3183 44.84 0 3918930..3919433 - 167 157963013 - Spea_3196 - alkylhydroperoxidase 3184 47.32 0 3919563..3920456 + 297 157963014 - Spea_3197 - LysR family transcriptional regulator 3185 46.74 0 3920537..3921103 - 188 157963015 - Spea_3198 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 3186 43.13 0 3921090..3921824 - 244 157963016 - Spea_3199 - DSBA oxidoreductase 3187 47.76 0 3921955..3924012 - 685 157963017 - Spea_3200 - cytochrome c biogenesis protein transmembrane region 3188 47.73 0 3924231..3924626 - 131 157963018 - Spea_3201 - hypothetical protein 3189 47.25 0 3924911..3927181 - 756 157963019 - Spea_3202 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3190 46.51 0 3927359..3928261 + 300 157963020 - Spea_3203 - LysR family transcriptional regulator 3191 42.25 0 3928312..3929040 - 242 157963021 - Spea_3204 - putative signal transduction protein 3192 48.51 +1 3929626..3930231 - 201 157963022 - Spea_3205 - GDSL family lipase 3193 45.63 0 3930329..3932182 - 617 157963023 - Spea_3206 - TonB-dependent receptor plug 3194 44.60 0 3932761..3933408 - 215 157963024 - Spea_3207 - hypothetical protein 3195 46.56 0 3933667..3934044 + 125 157963025 - Spea_3208 - CopY family transcriptional regulator 3196 47.40 0 3934041..3935234 + 397 157963026 - Spea_3209 - TonB family protein 3197 45.93 0 3935332..3936117 - 261 157963027 - Spea_3210 - hypothetical protein 3198 46.74 0 3936609..3937130 - 173 157963028 - Spea_3211 - NADPH-dependent FMN reductase 3199 48.10 0 3937337..3938230 + 297 157963029 - Spea_3212 - LysR family transcriptional regulator 3200 47.49 0 3938389..3940557 + 722 157963030 - Spea_3213 - extracellular solute-binding protein 3201 48.75 +1 3940661..3941380 - 239 157963031 - Spea_3214 - pseudouridine synthase 3202 50.39 +1 3941581..3942618 + 345 157963032 - Spea_3215 - dihydroorotase 3203 41.74 -1 3942888..3943232 + 114 157963033 - Spea_3216 - hypothetical protein 3204 48.33 0 3943326..3944105 - 259 157963034 - Spea_3217 - hypothetical protein 3205 43.37 0 3944366..3944644 + 92 157963035 - Spea_3218 - PpiC-type peptidyl-prolyl cis-trans isomerase 3206 46.20 0 3944934..3946013 - 359 157963036 - Spea_3219 - glucose sorbosone dehydrogenase 3207 43.46 0 3946456..3948450 - 664 157963037 - Spea_3220 - hypothetical protein 3208 43.43 0 3948434..3949453 - 339 157963038 - Spea_3221 - glutathione synthetase 3209 41.83 -1 3949982..3950770 + 262 157963039 - Spea_3222 - hypothetical protein 3210 42.05 0 3950863..3951894 - 343 157963040 - Spea_3223 - diguanylate cyclase 3211 41.35 -1 3952171..3953280 - 369 157963041 - Spea_3224 - putative outer membrane adhesin like proteiin 3212 37.36 -2 3953305..3954198 - 297 157963042 - Spea_3225 - hypothetical protein 3213 39.22 -1 3954297..3954941 - 214 157963043 - Spea_3226 - LVIVD repeat-containing protein 3214 49.26 +1 3955205..3956749 + 514 157963044 - Spea_3227 - ferredoxin-dependent glutamate synthase 3215 46.70 0 3956915..3957505 - 196 157963045 - Spea_3228 - HAD family hydrolase 3216 45.07 0 3957552..3960125 - 857 157963046 - Spea_3229 - protein-P-II uridylyltransferase 3217 47.10 0 3960539..3960952 + 137 157963047 - Spea_3230 - hypothetical protein 3218 44.27 0 3960980..3961939 - 319 157963048 - Spea_3231 - hypothetical protein 3219 48.50 +1 3962085..3963554 - 489 157963049 - Spea_3232 - beta-lactamase domain-containing protein 3220 43.83 0 3963814..3965004 - 396 157963050 - Spea_3233 - hypothetical protein 3221 40.16 -1 3965497..3965745 + 82 157963051 - Spea_3234 - hypothetical protein 3222 44.16 0 3965819..3967702 - 627 157963052 - Spea_3235 - curlin-associated protein 3223 44.71 0 3968235..3969122 + 295 157963053 - Spea_3236 - band 7 protein 3224 42.15 0 3969372..3971117 + 581 157963054 - Spea_3237 - hypothetical protein 3225 43.33 0 3971380..3972459 + 359 157963055 - Spea_3238 - PepSY-associated TM helix domain-containing protein 3226 48.97 +1 3972694..3974772 + 692 157963056 - Spea_3239 - endothelin-converting protein 1 3227 48.95 +1 3975003..3975860 + 285 157963057 - Spea_3240 - putative glutathione S-transferase YghU 3228 46.09 0 3975935..3976420 - 161 157963058 - Spea_3241 - hypothetical protein 3229 48.59 +1 3976644..3976892 - 82 157963059 - Spea_3242 - hypothetical protein 3230 47.33 0 3977193..3978557 + 454 157963060 - Spea_3243 - guanine deaminase 3231 49.49 +1 3978674..3980059 - 461 157963061 - Spea_3244 - xanthine/uracil/vitamin C permease 3232 46.48 0 3980467..3981219 + 250 157963062 - Spea_3245 - SpoOM family protein 3233 47.36 0 3981385..3982539 - 384 157963063 - Spea_3246 - mandelate racemase/muconate lactonizing protein 3234 46.15 0 3982544..3984142 - 532 157963064 - Spea_3247 - BCCT transporter 3235 50.96 +1 3984241..3985596 - 451 157963065 - Spea_3248 - FAD dependent oxidoreductase 3236 46.60 0 3985774..3986421 + 215 157963066 - Spea_3249 - GntR family transcriptional regulator 3237 49.14 +1 3986699..3987394 - 231 157963067 - Spea_3250 - CG2839 3238 46.81 0 3987774..3988997 + 407 157963068 - Spea_3251 - sodium/glutamate symporter 3239 48.25 0 3989316..3990227 - 303 157963069 - Spea_3252 - hypothetical protein 3240 47.33 0 3990520..3992706 - 728 157963070 - Spea_3253 - hypothetical protein 3241 42.42 0 3992926..3993156 - 76 157963071 - Spea_3254 - hypothetical protein 3242 44.87 0 3993335..3994522 - 395 157963072 - Spea_3255 - ankyrin 3243 48.01 0 3994737..3995138 - 133 157963073 - Spea_3256 - hypothetical protein 3244 39.71 -1 3995265..3996017 - 250 157963074 - Spea_3257 - integrase catalytic region 3245 41.60 -1 3996101..3996499 - 132 157963075 - Spea_3258 - transposase 3246 50.32 +1 3996613..3998196 - 527 157963076 - Spea_3259 - Na+/H+ antiporter NhaC 3247 39.68 -1 3998909..3999097 + 62 157963077 - Spea_3260 - hypothetical protein 3248 43.81 0 3999616..3999825 + 69 157963078 - Spea_3261 - cold-shock DNA-binding domain-containing protein 3249 32.86 -2 4000195..4000404 + 69 157963079 - Spea_3262 - hypothetical protein 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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