IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3133	 47.31	0	3851974..3852624	+	216	157962963	-	Spea_3146	-	nicotinate (nicotinamide) nucleotide adenylyltransferase
3134	 41.82	-1	3852723..3853052	+	109	157962964	-	Spea_3147	-	iojap-like protein
3135	 47.13	0	3853052..3853522	+	156	157962965	-	Spea_3148	-	SPOUT methyltransferase superfamily protein
3136	 46.53	0	3853607..3855463	+	618	157962966	-	Spea_3149	-	peptidoglycan glycosyltransferase
3137	 48.33	0	3855460..3856566	+	368	157962967	-	Spea_3150	-	rod shape-determining protein RodA
3138	 44.34	0	3856668..3857666	+	332	157962968	-	Spea_3151	-	lytic murein transglycosylase B
3139	 47.38	0	3857653..3858435	+	260	157962969	-	Spea_3152	-	rare lipoprotein A
3140	 44.16	0	3858541..3859713	+	390	157962970	-	Spea_3153	-	Serine-type D-Ala-D-Ala carboxypeptidase
3141	 41.95	0	3859846..3860112	+	88	157962971	-	Spea_3154	-	hypothetical protein
3142	 45.61	0	3860207..3860866	+	219	157962972	-	Spea_3155	-	lipoate-protein ligase B
3143	 46.48	0	3860859..3861824	+	321