IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3128	 48.89	+1	3845509..3847044	+	511	157962958	-	Spea_3141	-	apolipoprotein N-acyltransferase
3129	 42.91	0	3847216..3847716	-	166	157962959	-	Spea_3142	-	hypothetical protein
3130	 45.99	0	3847810..3850416	+	868	157962960	-	Spea_3143	-	leucyl-tRNA synthetase
3131	 49.09	+1	3850449..3850943	+	164	157962961	-	Spea_3144	-	rare lipoprotein B
3132	 47.19	0	3850943..3851974	+	343	157962962	-	Spea_3145	-	DNA polymerase III, delta subunit
3133	 47.31	0	3851974..3852624	+	216	157962963	-	Spea_3146	-	nicotinate (nicotinamide) nucleotide adenylyltransferase
3134	 41.82	-1	3852723..3853052	+	109	157962964	-	Spea_3147	-	iojap-like protein
3135	 47.13	0	3853052..3853522	+	156	157962965	-	Spea_3148	-	SPOUT methyltransferase superfamily protein
3136	 46.53	0	3853607..3855463	+	618	157962966	-	Spea_3149	-	peptidoglycan glycosyltransferase
3137	 48.33	0	3855460..3856566	+	368	157962967	-	Spea_3150	-	rod shape-determining protein RodA
3138	 44.34	0	3856668..3857666	+	332