IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3122	 47.33	0	3839549..3840748	-	399	157962952	-	Spea_3135	-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
3123	 46.03	0	3841058..3841372	+	104	157962953	-	Spea_3136	-	hypothetical protein
3124	 44.47	0	3841468..3842895	+	475	157962954	-	Spea_3137	-	tRNA-i(6)A37 thiotransferase enzyme MiaB
3125	 46.78	0	3843057..3844097	+	346	157962955	-	Spea_3138	-	PhoH family protein
3126	 43.10	0	3844090..3844560	+	156	157962956	-	Spea_3139	-	putative metalloprotease
3127	 44.44	0	3844588..3845469	+	293	157962957	-	Spea_3140	-	CBS domain-containing protein
3128	 48.89	+1	3845509..3847044	+	511	157962958	-	Spea_3141	-	apolipoprotein N-acyltransferase
3129	 42.91	0	3847216..3847716	-	166	157962959	-	Spea_3142	-	hypothetical protein
3130	 45.99	0	3847810..3850416	+	868	157962960	-	Spea_3143	-	leucyl-tRNA synthetase
3131	 49.09	+1	3850449..3850943	+	164	157962961	-	Spea_3144	-	rare lipoprotein B
3132	 47.19	0	3850943..3851974	+	343	157962962	-	Spea_