IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3113	 46.41	0	3828949..3830034	-	361	157962943	-	Spea_3126	-	peptide chain release factor 1
3114	 45.00	0	3830048..3831298	-	416	157962944	-	Spea_3127	-	glutamyl-tRNA reductase
3115	 46.52	0	3831568..3832227	+	219	157962945	-	Spea_3128	-	outer membrane lipoprotein LolB
3116	 46.78	0	3832224..3833078	+	284	157962946	-	Spea_3129	-	4-diphosphocytidyl-2C-methyl-D-erythritol kinase
3117	 45.64	0	3833116..3834090	+	324	157962947	-	Spea_3130	-	ribose-phosphate pyrophosphokinase
3118	 42.25	0	3834174..3834599	-	141	157962948	-	Spea_3131	-	hypothetical protein
3119	 41.97	0	3834636..3835052	-	138	157962949	-	Spea_3132	-	hypothetical protein
3120	 45.05	0	3837555..3838646	-	363	157962950	-	Spea_3133	-	translation-associated GTPase
3121	 46.09	0	3838700..3839326	-	208	157962951	-	Spea_3134	-	peptidyl-tRNA hydrolase
3122	 47.33	0	3839549..3840748	-	399	157962952	-	Spea_3135	-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
3123	 46.03	0	3841058..3841372	+	104