IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3108	 46.29	0	3824190..3825038	-	282	157962938	-	Spea_3121	-	2-dehydro-3-deoxyphosphooctonate aldolase
3109	 45.86	0	3825108..3826376	-	422	157962939	-	Spea_3122	-	hypothetical protein
3110	 43.98	0	3826590..3827378	-	262	157962940	-	Spea_3123	-	hypothetical protein
3111	 41.16	-1	3827378..3827773	-	131	157962941	-	Spea_3124	-	invasion gene expression up-regulator SirB
3112	 45.31	0	3828059..3828901	-	280	157962942	-	Spea_3125	-	HemK family modification methylase
3113	 46.41	0	3828949..3830034	-	361	157962943	-	Spea_3126	-	peptide chain release factor 1
3114	 45.00	0	3830048..3831298	-	416	157962944	-	Spea_3127	-	glutamyl-tRNA reductase
3115	 46.52	0	3831568..3832227	+	219	157962945	-	Spea_3128	-	outer membrane lipoprotein LolB
3116	 46.78	0	3832224..3833078	+	284	157962946	-	Spea_3129	-	4-diphosphocytidyl-2C-methyl-D-erythritol kinase
3117	 45.64	0	3833116..3834090	+	324	157962947	-	Spea_3130	-	ribose-phosphate pyrophosphokinase
3118	 42.25	0	3834174..3834599	-	141