IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3098	 44.70	0	3813481..3814140	+	219	157962928	-	Spea_3111	-	peptidyl-prolyl cis-trans isomerase cyclophilin type
3099	 44.86	0	3814259..3814579	+	106	157962929	-	Spea_3112	-	hypothetical protein
3100	 45.21	0	3815049..3816479	+	476	157962930	-	Spea_3113	-	major facilitator transporter
3101	 43.21	0	3816716..3817201	-	161	157962931	-	Spea_3114	-	nucleotide-binding protein
3102	 41.03	-1	3817303..3817731	+	142	157962932	-	Spea_3115	-	VanZ family protein
3103	 47.29	0	3817738..3818769	+	343	157962933	-	Spea_3116	-	2-dehydropantoate 2-reductase
3104	 47.33	0	3818940..3820439	+	499	157962934	-	Spea_3117	-	sodium:neurotransmitter symporter
3105	 46.33	0	3820639..3821346	+	235	157962935	-	Spea_3118	-	phosphoesterase PA-phosphatase related
3106	 46.58	0	3821350..3822225	-	291	157962936	-	Spea_3119	-	hypothetical protein
3107	 46.26	0	3822410..3823972	-	520	157962937	-	Spea_3120	-	AbgT putative transporter
3108	 46.29	0	3824190..3825038	-	282	157962938	-	S